Difference between revisions of "Manual-pathmodel inference"

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Latest revision as of 15:38, 14 October 2019

 COMMON NAMEEc numberReconstruction categoryReconstruction toolReconstruction sourceReconstruction commentGene associatedIn pathway
RXN-17368EC-6.3.4Gap-filling
Manual		MenecoGap-filling-gapfilling solution with meneco draft medium
Manual-pathmodel inference		Added for gapfilling
Meneco;brawley2017;tblastn		Scaffold115 51547 52668PWY-7751
RXN-17371EC-6.3.2Gap-filling
Manual		MenecoGap-filling-gapfilling solution with meneco draft medium
Manual-pathmodel inference		Added for gapfilling
Meneco;brawley2017;tblastn		Scaffold115 53074 54093
RXN-17372EC-4.2.3.154Gap-filling
Manual		MenecoGap-filling-gapfilling solution with meneco draft medium
Manual-pathmodel inference		Added for gapfilling
Dhq synthase domain;meneco;brawley2017		CHC T00001829001PWY-7751
RXN-17896EC-2.1.1Gap-filling
Manual		MenecoGap-filling-gapfilling solution with meneco draft medium
Manual-pathmodel inference		Added for gapfilling
Methyltransf 3 domain;meneco;brawley2017		CHC T00001829001PWY-7751
SQUALENE-MONOOXYGENASE-RXNEC-1.14.14.17ManualManual-pathmodel inferenceTblastn plus rnaseq evidenceScaffold90 7511 6165
Scaffold20 461442 460650
Scaffold57 152407 364140		PWY-6098
PWY-5670
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