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| Line 1: |
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| | [[Category:reaction]] | | [[Category:reaction]] |
| − | == Reaction PROTEIN-TYROSINE-PHOSPHATASE-RXN == | + | == Reaction 2KETO-3METHYLVALERATE-RXN == |
| | * common-name: | | * common-name: |
| − | ** protein-tyrosine phosphatase | + | ** (s)-3-methyl-2-oxopentanoate dehydrogenase (acylating) |
| − | ** protein tyrosine phosphatase | + | ** 3-methyl-2-oxopentanoate dehydrogenase |
| | * ec-number: | | * ec-number: |
| − | ** [http://enzyme.expasy.org/EC/3.1.3.48 ec-3.1.3.48] | + | ** [http://enzyme.expasy.org/EC/1.2.1.25 ec-1.2.1.25] |
| | * direction: | | * direction: |
| − | ** left-to-right | + | ** reversible |
| | == Reaction formula == | | == Reaction formula == |
| − | * 1 [[Protein-tyrosine-phosphates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[Protein-Tyrosines]][c] | + | * 1 [[2-KETO-3-METHYL-VALERATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[2-METHYL-BUTYRYL-COA]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] |
| | == Gene(s) associated with this reaction == | | == Gene(s) associated with this reaction == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | * Gene: [[E_subulatus_14800]] |
| − | * Gene: [[E_subulatus_09095]] | |
| | ** Category: [[annotation]] | | ** Category: [[annotation]] |
| | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | * Gene: [[E_subulatus_21808]]
| + | == Pathway(s) == |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_15399]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_22047]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_21809]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_23947]]
| |
| − | ** Category: [[annotation]]
| |
| | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | * Gene: [[E_subulatus_01178]] | + | ** '''6''' reactions found over '''6''' reactions in the full pathway |
| − | ** Category: [[annotation]] | |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_16551]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_14526]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_01058]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_09092]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_22331]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_02195]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_15371]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_24826]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_24825]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_01057]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_04737]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_09094]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_02194]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_10800]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_09093]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_01055]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_15739]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_23057]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_23946]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_24394]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_15738]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_15398]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_04529]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_23362]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_22048]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_01179]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_15397]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_02420]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_01056]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_24228]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_09096]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_23948]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_01054]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_00732]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | </div>
| |
| − | == Pathway(s) ==
| |
| | == Reconstruction information == | | == Reconstruction information == |
| | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a |
| | == External links == | | == External links == |
| − | * DB : UNIPROT | + | * DB : RHEA |
| − | * ID : Q91054 | + | * ID : 30907 |
| − | {{#set: common-name=protein-tyrosine phosphatase|protein tyrosine phosphatase}} | + | {{#set: common-name=3-methyl-2-oxopentanoate dehydrogenase|(s)-3-methyl-2-oxopentanoate dehydrogenase (acylating)}} |
| − | {{#set: ec-number=ec-3.1.3.48}} | + | {{#set: ec-number=ec-1.2.1.25}} |
| − | {{#set: direction=left-to-right}} | + | {{#set: direction=reversible}} |
| − | {{#set: nb gene associated=41}} | + | {{#set: nb gene associated=1}} |
| − | {{#set: nb pathway associated=0}} | + | {{#set: nb pathway associated=1}} |
| | {{#set: reconstruction category=annotation}} | | {{#set: reconstruction category=annotation}} |
| | {{#set: reconstruction tool=pathwaytools}} | | {{#set: reconstruction tool=pathwaytools}} |
| | {{#set: reconstruction comment=n.a}} | | {{#set: reconstruction comment=n.a}} |
| | {{#set: reconstruction source=ectocarpus_subulatus}} | | {{#set: reconstruction source=ectocarpus_subulatus}} |
