Difference between revisions of "RXN-14325"

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(Created page with "Category:reaction == Reaction 2TRANSKETO-RXN == * common-name: ** transketolase * ec-number: ** [http://enzyme.expasy.org/EC/2.2.1.1 ec-2.2.1.1] * direction: ** reversible...")
(Created page with "Category:reaction == Reaction ACETATE--COA-LIGASE-RXN == * common-name: ** acetyl-coa synthetase (amp-forming) * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.1 ec-6.2....")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2TRANSKETO-RXN ==
+
== Reaction ACETATE--COA-LIGASE-RXN ==
 
* common-name:
 
* common-name:
−
** transketolase
+
** acetyl-coa synthetase (amp-forming)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.2.1.1 ec-2.2.1.1]
+
** [http://enzyme.expasy.org/EC/6.2.1.1 ec-6.2.1.1]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ERYTHROSE-4P]][c] '''+''' 1 [[XYLULOSE-5-PHOSPHATE]][c] '''<=>''' 1 [[FRUCTOSE-6P]][c] '''+''' 1 [[GAP]][c]
+
* 1 [[ACET]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_01924]]
+
* Gene: [[E_subulatus_10760]]
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[E_subulatus_25188]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_25187]]
+
* Gene: [[E_subulatus_10759]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[PWY-6672]], cis-geranyl-CoA degradation:
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-7118]], chitin deacetylation:
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
* [[PWY0-1313]], acetate conversion to acetyl-CoA:
−
** '''9''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
** '''9''' reactions found over '''8''' reactions in the full pathway
+
* [[PWY66-21]], ethanol degradation II:
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY66-161]], ethanol degradation III:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY66-162]], ethanol degradation IV:
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* DB : LIGAND-RXN
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* ID : R01830
+
* METANETX-RXN : MNXR95413
−
{{#set: common-name=transketolase}}
+
* RHEA:
−
{{#set: ec-number=ec-2.2.1.1}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23176 23176]
−
{{#set: direction=reversible}}
+
* LIGAND-RXN:
−
{{#set: nb gene associated=3}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00235 R00235]
−
{{#set: nb pathway associated=7}}
+
* UNIPROT:
−
{{#set: reconstruction category=annotation|orthology}}
+
** [http://www.uniprot.org/uniprot/P27095 P27095]
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
** [http://www.uniprot.org/uniprot/P31638 P31638]
 +
** [http://www.uniprot.org/uniprot/Q12662 Q12662]
 +
** [http://www.uniprot.org/uniprot/P28812 P28812]
 +
** [http://www.uniprot.org/uniprot/P27550 P27550]
 +
** [http://www.uniprot.org/uniprot/O34613 O34613]
 +
** [http://www.uniprot.org/uniprot/Q9PMD2 Q9PMD2]
 +
** [http://www.uniprot.org/uniprot/P36333 P36333]
 +
** [http://www.uniprot.org/uniprot/Q01574 Q01574]
 +
** [http://www.uniprot.org/uniprot/P39062 P39062]
 +
** [http://www.uniprot.org/uniprot/Q01576 Q01576]
 +
** [http://www.uniprot.org/uniprot/P52910 P52910]
 +
** [http://www.uniprot.org/uniprot/Q55404 Q55404]
 +
** [http://www.uniprot.org/uniprot/P16928 P16928]
 +
** [http://www.uniprot.org/uniprot/P16929 P16929]
 +
** [http://www.uniprot.org/uniprot/O68040 O68040]
 +
** [http://www.uniprot.org/uniprot/P78773 P78773]
 +
</div>
 +
{{#set: common-name=acetyl-coa synthetase (amp-forming)}}
 +
{{#set: ec-number=ec-6.2.1.1}}
 +
{{#set: direction=left-to-right}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=6}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 15:22, 15 March 2021

Reaction ACETATE--COA-LIGASE-RXN

  • common-name:
    • acetyl-coa synthetase (amp-forming)
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6672, cis-geranyl-CoA degradation:
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-7118, chitin deacetylation:
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1313, acetate conversion to acetyl-CoA:
    • 1 reactions found over 1 reactions in the full pathway
  • PWY66-21, ethanol degradation II:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY66-161, ethanol degradation III:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY66-162, ethanol degradation IV:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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