Difference between revisions of "GALACTOKIN-RXN"

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(Created page with "Category:reaction == Reaction RXN0-2382 == * common-name: ** tryptophan synthase * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.122 ec-4.2.1.122] * direction: ** left-...")
(Created page with "Category:reaction == Reaction GALACTOKIN-RXN == * common-name: ** galactokinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.6 ec-2.7.1.6] * direction: ** reversible...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN0-2382 ==
+
== Reaction GALACTOKIN-RXN ==
 
* common-name:
 
* common-name:
−
** tryptophan synthase
+
** galactokinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.1.122 ec-4.2.1.122]
+
** [http://enzyme.expasy.org/EC/2.7.1.6 ec-2.7.1.6]
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[INDOLE]][c] '''+''' 1 [[SER]][c] '''=>''' 1 [[TRP]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[ALPHA-D-GALACTOSE]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[GALACTOSE-1P]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[E_subulatus_15511]]
−
* Gene: [[E_subulatus_10240]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_10241]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_11918]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_00782]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_10239]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_00781]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_18297]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_00779]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_00780]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[TRPSYN-PWY]], L-tryptophan biosynthesis:
+
* [[PWY-3821]], D-galactose detoxification:
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY66-422]]:
 +
** '''5''' reactions found over '''n.a''' reactions in the full pathway
 +
* [[PWY-6317]], D-galactose degradation I (Leloir pathway):
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6527]], stachyose degradation:
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR104946
+
* METANETX-RXN : MNXR99985
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26435 26435]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13556 13556]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00674 R00674]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01092 R01092]
−
{{#set: common-name=tryptophan synthase}}
+
* UNIPROT:
−
{{#set: ec-number=ec-4.2.1.122}}
+
** [http://www.uniprot.org/uniprot/P09608 P09608]
−
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/Q01415 Q01415]
−
{{#set: nb gene associated=8}}
+
** [http://www.uniprot.org/uniprot/P22713 P22713]
−
{{#set: nb pathway associated=1}}
+
** [http://www.uniprot.org/uniprot/P31767 P31767]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/Q8X7P4 Q8X7P4]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/Q9R7D7 Q9R7D7]
 +
** [http://www.uniprot.org/uniprot/P96993 P96993]
 +
** [http://www.uniprot.org/uniprot/P04385 P04385]
 +
** [http://www.uniprot.org/uniprot/P0A6T3 P0A6T3]
 +
** [http://www.uniprot.org/uniprot/P13227 P13227]
 +
** [http://www.uniprot.org/uniprot/P39574 P39574]
 +
** [http://www.uniprot.org/uniprot/P13045 P13045]
 +
** [http://www.uniprot.org/uniprot/Q9SEE5 Q9SEE5]
 +
{{#set: common-name=galactokinase}}
 +
{{#set: ec-number=ec-2.7.1.6}}
 +
{{#set: direction=reversible}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=4}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Latest revision as of 19:41, 17 March 2021

Reaction GALACTOKIN-RXN

  • common-name:
    • galactokinase
  • ec-number:
  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-3821, D-galactose detoxification:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY66-422:
    • 5 reactions found over n.a reactions in the full pathway
  • PWY-6317, D-galactose degradation I (Leloir pathway):
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6527, stachyose degradation:
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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