Difference between revisions of "FSU RS14875"
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(Created page with "Category:gene == Gene FSU_RS02780 == * transcription-direction: ** positive * centisome-position: ** 16.910105 * left-end-position: ** 649856 * right-end-position: **...") |
(Created page with "Category:gene == Gene FSU_RS14875 == * transcription-direction: ** negative * centisome-position: ** 93.98783 * left-end-position: ** 3611956 * right-end-position: **...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene FSU_RS14875 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** negative |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 93.98783 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 3611956 |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 3613065 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[fsucgem]] | * [[fsucgem]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[HISTAMINOTRANS-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
+ | *** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a | ||
+ | *** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a | ||
*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a | *** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a | ||
*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a | *** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a | ||
+ | *** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a | ||
+ | * [[TYROSINE-AMINOTRANSFERASE-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a | ||
+ | *** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a | ||
+ | *** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | ** '''2''' reactions found over ''' | + | * [[HISTSYN-PWY]] |
− | * [[PWY- | + | ** '''10''' reactions found over '''10''' reactions in the full pathway |
− | ** '''2''' reactions found over ''' | + | * [[PWY-3581]] |
− | {{#set: transcription-direction= | + | ** '''2''' reactions found over '''11''' reactions in the full pathway |
− | {{#set: centisome-position= | + | * [[TYRSYN]] |
− | {{#set: left-end-position= | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
− | {{#set: right-end-position= | + | * [[PWY-5048]] |
+ | ** '''1''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY-5886]] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY-8016]] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY3O-4108]] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-5151]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[TYRFUMCAT-PWY]] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7514]] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-7518]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-5754]] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | </div> | ||
+ | {{#set: transcription-direction=negative}} | ||
+ | {{#set: centisome-position=93.98783 }} | ||
+ | {{#set: left-end-position=3611956}} | ||
+ | {{#set: right-end-position=3613065}} | ||
{{#set: organism associated=fsucgem}} | {{#set: organism associated=fsucgem}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=12}} |
Latest revision as of 11:21, 17 October 2022
Contents
Gene FSU_RS14875
- transcription-direction:
- negative
- centisome-position:
- 93.98783
- left-end-position:
- 3611956
- right-end-position:
- 3613065
Organism(s) associated with this gene
Reaction(s) associated
- HISTAMINOTRANS-RXN
- Category: annotation
- source: fibrobacter_succinogenes1; tool: pathwaytools; comment: n.a
- Category: orthology
- source: ecoli; tool: orthofinder; comment: n.a
- source: bifidobacterium; tool: orthofinder; comment: n.a
- source: faecalibacterium; tool: orthofinder; comment: n.a
- source: plantarum; tool: orthofinder; comment: n.a
- source: bthetaiotaomicron; tool: orthofinder; comment: n.a
- Category: annotation
- TYROSINE-AMINOTRANSFERASE-RXN
- Category: orthology
- source: faecalibacterium; tool: orthofinder; comment: n.a
- source: plantarum; tool: orthofinder; comment: n.a
- source: bthetaiotaomicron; tool: orthofinder; comment: n.a
- Category: orthology
Pathway(s) associated
- HISTSYN-PWY
- 10 reactions found over 10 reactions in the full pathway
- PWY-3581
- 2 reactions found over 11 reactions in the full pathway
- TYRSYN
- 3 reactions found over 3 reactions in the full pathway
- PWY-5048
- 1 reactions found over 10 reactions in the full pathway
- PWY-5886
- 1 reactions found over 1 reactions in the full pathway
- PWY-8016
- 1 reactions found over 5 reactions in the full pathway
- PWY3O-4108
- 4 reactions found over 4 reactions in the full pathway
- PWY-5151
- 1 reactions found over 2 reactions in the full pathway
- TYRFUMCAT-PWY
- 1 reactions found over 5 reactions in the full pathway
- PWY-7514
- 1 reactions found over 3 reactions in the full pathway
- PWY-7518
- 1 reactions found over 2 reactions in the full pathway
- PWY-5754
- 1 reactions found over 5 reactions in the full pathway