Difference between revisions of "FISUC RS12545"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene FSU_RS01035 == * common-name: ** quec * transcription-direction: ** negative * centisome-position: ** 6.479384 * left-end-position: ** 249003 * r...")
(Created page with "Category:gene == Gene FISUC_RS12545 == * transcription-direction: ** positive * centisome-position: ** 80.33128 * left-end-position: ** 3086838 * right-end-position: *...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene FSU_RS01035 ==
+
== Gene FISUC_RS12545 ==
−
* common-name:
 
−
** quec
 
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* centisome-position:
 
* centisome-position:
−
** 6.479384    
+
** 80.33128    
 
* left-end-position:
 
* left-end-position:
−
** 249003
+
** 3086838
 
* right-end-position:
 
* right-end-position:
−
** 249656
+
** 3087614
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[fsucgem]]
 
* [[fsucgem]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-12093]]
+
* [[R601-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-14963]]
−
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
+
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14971]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15378]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE6-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6703]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
* [[FERMENTATION-PWY]]
−
{{#set: common-name=quec}}
+
** '''14''' reactions found over '''16''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[P23-PWY]]
−
{{#set: centisome-position=6.479384   }}
+
** '''11''' reactions found over '''12''' reactions in the full pathway
−
{{#set: left-end-position=249003}}
+
* [[P42-PWY]]
−
{{#set: right-end-position=249656}}
+
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5392]]
 +
** '''8''' reactions found over '''12''' reactions in the full pathway
 +
* [[P108-PWY]]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY0-1576]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY0-1336]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[REDCITCYC]]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY0-1582]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7384]]
 +
** '''8''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-561]]
 +
** '''6''' reactions found over '''4''' reactions in the full pathway
 +
* [[TCA]]
 +
** '''10''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7254]]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5690]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6969]]
 +
** '''9''' reactions found over '''12''' reactions in the full pathway
 +
* [[P105-PWY]]
 +
** '''8''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6728]]
 +
** '''9''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-3781]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY0-1353]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY0-1329]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7279]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-4302]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY66-398]]
 +
** '''7''' reactions found over '''11''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=positive}}
 +
{{#set: centisome-position=80.33128   }}
 +
{{#set: left-end-position=3086838}}
 +
{{#set: right-end-position=3087614}}
 
{{#set: organism associated=fsucgem}}
 
{{#set: organism associated=fsucgem}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=23}}

Latest revision as of 11:21, 17 October 2022

Gene FISUC_RS12545

  • transcription-direction:
    • positive
  • centisome-position:
    • 80.33128
  • left-end-position:
    • 3086838
  • right-end-position:
    • 3087614

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • FERMENTATION-PWY
    • 14 reactions found over 16 reactions in the full pathway
  • P23-PWY
    • 11 reactions found over 12 reactions in the full pathway
  • P42-PWY
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-5392
    • 8 reactions found over 12 reactions in the full pathway
  • P108-PWY
    • 4 reactions found over 7 reactions in the full pathway
  • PWY0-1576
    • 1 reactions found over 2 reactions in the full pathway
  • PWY0-1336
    • 1 reactions found over 2 reactions in the full pathway
  • REDCITCYC
    • 7 reactions found over 9 reactions in the full pathway
  • PWY0-1582
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7384
    • 8 reactions found over 10 reactions in the full pathway
  • PWY-561
    • 6 reactions found over 4 reactions in the full pathway
  • TCA
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-7254
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-5690
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-6969
    • 9 reactions found over 12 reactions in the full pathway
  • P105-PWY
    • 8 reactions found over 11 reactions in the full pathway
  • PWY-6728
    • 9 reactions found over 19 reactions in the full pathway
  • PWY-3781
    • 2 reactions found over 4 reactions in the full pathway
  • PWY0-1353
    • 1 reactions found over 2 reactions in the full pathway
  • PWY0-1329
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7279
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-4302
    • 2 reactions found over 3 reactions in the full pathway
  • PWY66-398
    • 7 reactions found over 11 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS12545&oldid=94704"