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 Common nameReaction foundTotal reactionCompletion rate
ENTNER-DOUDOROFF-PWYEntner-Doudoroff pathway I
ED pathway
1250.0
ETHYL-PWYEthylene biosynthesis I (plants)
Ethene biosynthesis from methionine
2367.0
ETOH-ACETYLCOA-ANA-PWYEthanol degradation I
Acetyl-CoA biosynthesis (from alcohol)
22100.0
Early SSR88100.0
FAO-PWYFatty acid β-oxidation I77100.0
FASYN-ELONG-PWYFatty acid elongation -- saturated3560.0
FASYN-INITIAL-PWYSuperpathway of fatty acid biosynthesis initiation (E. coli)5862.0
FERMENTATION-PWYMixed acid fermentation
Fermentation
111669.0
FESULFOX-PWYSulfur oxidation II (Fe+3-dependent)1333.0
GLNSYN-PWYL-glutamine biosynthesis I11100.0
GLUCONEO-PWYGluconeogenesis I121392.0
GLUCONSUPER-PWYD-gluconate degradation
Gluconate utilization
11100.0
GLUCOSE1PMETAB-PWYGlucose and glucose-1-phosphate degradation2540.0
GLUDEG-I-PWYGABA shunt1617.0
GLUDEG-II-PWYL-glutamate degradation VII (to butanoate)
L-glutamate fermentation
Mesaconate pathway
L-glutamate degradation VII (to butyrate)
3650.0
GLUT-REDOX-PWYGlutathione-glutaredoxin redox reactions1333.0
GLUTAMATE-DEG1-PWYL-glutamate degradation I
GDH shunt
11100.0
GLUTAMATE-SYN2-PWYL-glutamate biosynthesis II11100.0
GLUTAMINDEG-PWYL-glutamine degradation I11100.0
GLUTATHIONESYN-PWYGlutathione biosynthesis22100.0
GLUTDEG-PWYL-glutamate degradation II
L-aspartate degradation
1250.0
GLUTORN-PWYL-ornithine biosynthesis I55100.0
GLUTSYNIII-PWYL-glutamate biosynthesis III11100.0
GLYCINE-SYN2-PWYGlycine biosynthesis II2367.0
GLYCLEAV-PWYGlycine cleavage
Glycine cleavage system
Glycine decarboxylase complex
Gcv system
Glycine cleavage complex
33100.0
GLYCOCAT-PWYGlycogen degradation I
Glycogen catabolism I
7888.0
GLYCOGENSYNTH-PWYGlycogen biosynthesis I (from ADP-D-Glucose)44100.0
GLYCOLYSISEmbden-Meyerhof-Parnas pathway
EMP pathway
Glycolysis I (from glucose 6-phosphate)
Embden-Meyerhof pathway
Glycolysis (plastidic)
1212100.0
GLYCOLYSIS-E-DSuperpathway of glycolysis and Entner-Doudoroff4667.0
GLYCOLYSIS-TCA-GLYOX-BYPASSSuperpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass3560.0
GLYOXYLATE-BYPASSGlyoxylate cycle
Glyoxylate bypass
Glyoxylate shunt
4667.0
GLYSYN-ALA-PWYGlycine biosynthesis III11100.0
GLYSYN-PWYGlycine biosynthesis I11100.0
GLYSYN-THR-PWYGlycine biosynthesis IV11100.0
HEME-BIOSYNTHESIS-IIHeme biosynthesis I (aerobic)44100.0
HEMESYN2-PWYHeme biosynthesis II (anaerobic)2450.0
HISDEG-PWYL-histidine degradation I1425.0
HISHP-PWYL-histidine degradation VI1812.0
HISTSYN-PWYL-histidine biosynthesis1010100.0
HOMOCYSDEGR-PWYL-cysteine biosynthesis III (from L-homocysteine)
L-homocysteine degradation
1425.0
HOMOSER-METSYN-PWYL-methionine biosynthesis I
L-methionine biosynthesis from L-homoserine
L-methionine biosynthesis by transsulfuration
5771.0
HOMOSER-THRESYN-PWYL-threonine biosynthesis22100.0
HOMOSERSYN-PWYL-homoserine biosynthesis33100.0
HSERMETANA-PWYL-methionine biosynthesis III
L-methionine biosynthesis by sulfhydrylation
2450.0
IDNCAT-PWYL-idonate degradation
L-idonic acid catabolism
L-idonate catabolism
1333.0
ILEUDEG-PWYL-isoleucine degradation I4667.0
ILEUSYN-PWYL-isoleucine biosynthesis I (from threonine)5771.0
KDO-LIPASYN-PWY(Kdo)2-lipid A biosynthesis I1250.0
KDO-NAGLIPASYN-PWYSuperpathway of (Kdo)2-lipid A biosynthesis31030.0
KDOSYN-PWYKdo transfer to lipid IVA I22100.0
LACTOSEUTIL-PWYLactose degradation II
Lactose degradation 2
1333.0
LARABITOLUTIL-PWYXylitol degradation
L-arabitol and xylitol utilization
L-arabitol and xylitol degradation
1250.0
LCYSDEG-PWYL-cysteine degradation II
L-cysteine catabolism
L-cysteine degradation
1333.0
LEU-DEG2-PWYL-leucine degradation I3650.0
LEUSYN-PWYL-leucine biosynthesis5683.0
LIPAS-PWYTriacylglycerol degradation
Triacylglyceride degradation
Triacylglycerol hydrolysis
Lipolysis
2450.0
LIPASYN-PWYPhospholipases
Phospholipase pathway
2540.0
LYSINE-AMINOAD-PWYL-lysine biosynthesis IV1911.0
LYSINE-DEG1-PWYL-lysine degradation XI (mammalian)1520.0
Late SSR88100.0
MALATE-ASPARTATE-SHUTTLE-PWYL-aspartate degradation II
Malate/L-aspartate shuttle pathway
22100.0
MALTOSECAT-PWYMaltose degradation
Maltose catabolism
1250.0
MANNCAT-PWYD-mannose degradation
Mannose degradation
11100.0
MANNIDEG-PWYMannitol degradation I11100.0
MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESISProtein N-glycosylation (eukaryotic, high mannose)
Mannosyl-chito-dolichol biosynthesis
Eukaryotic N-linked glycosylation
Dolichyl-diphosphooligosaccharide biosynthesis and attachment
151979.0
MENAQUINONESYN-PWYMenaquinol-8 biosynthesis
Vitamin K2 biosynthesis I
Menaquinone-8 biosynthesis
11100.0
METHIONINE-DEG1-PWYL-methionine degradation I (to L-homocysteine)2367.0
METHYLGALLATE-DEGRADATION-PWYMethylgallate degradation1617.0
NAD-BIOSYNTHESIS-IINAD salvage pathway III
Nicotinamide adenine dinucleotide salvage
3560.0
NADPHOS-DEPHOS-PWYNAD phosphorylation and dephosphorylation33100.0
NADPHOS-DEPHOS-PWY-1NAD phosphorylation and transhydrogenation22100.0
NONMEVIPP-PWYNonmevalonate isopentenyl diphosphate biosynthesis
Methylerythritol phosphate degradation
MEP degradation
Deoxyxylulose phosphate pathway
DOXP pathway
Rohmer pathway
Isopentenyl diphosphate biosynthesis -- mevalonate-independent
Nonmevalonate isoprenoid pathway
MEP pathway
Methylerythritol phosphate pathway I
7978.0
NONOXIPENT-PWYPentose phosphate pathway (non-oxidative branch)55100.0
NPGLUCAT-PWYEntner-Doudoroff pathway II (non-phosphorylative)
Non-phosphorylated glucose catabolism
Glucose degradation
Non-phosphorylated glucose degradation
3933.0
ORN-AMINOPENTANOATE-CAT-PWYL-ornithine degradation I (L-proline biosynthesis)11100.0
ORNDEG-PWYSuperpathway of ornithine degradation2633.0
OXIDATIVEPENT-PWYPentose phosphate pathway (oxidative branch) I33100.0
P101-PWYEctoine biosynthesis2540.0
P105-PWYTCA cycle IV (2-oxoglutarate decarboxylase)
Citric acid cycle
Tricarboxylic acid cycle
Szent-Gyorgyi-Krebs cycle
Krebs cycle
81173.0
P108-PWYPyruvate fermentation to propanoate I
Succinate-propionate fermentation pathway
Pyruvate fermentation to propionate I
Succinate-propanoate fermentation pathway
2728.999999999999996
P121-PWYAdenine and adenosine salvage I
Purine salvage
Salvage pathway of adenosine nucleosides
Adenosine nucleosides salvage I
1250.0
P122-PWYHeterolactic fermentation
Lactate heterofermentation
Glucose fermentation to lactate
Phosphoketolase pathway
151883.0
P124-PWYBifidobacterium shunt
Bifidum fermentation
Bifidum pathway
Fructose-6-phosphate pathway
Bifidum shunt
Glucose fermentation to lactate (Bifidobacteria)
111573.0
P142-PWYAcetate fermentation
Pyruvate fermentation to acetate I
1333.0
P161-PWYAcetylene degradation
Acetylene fermentation
2540.0
P162-PWYL-glutamate fermentation
L-glutamate degradation V (via hydroxyglutarate)
41136.0
P163-PWYL-lysine fermentation to acetate and butanoate
3-keto-5-aminohexanoate pathway
L-lysine fermentation to acetate and butyrate
11010.0
P164-PWYPurine nucleobases degradation I (anaerobic)
Purine fermentation
31718.0
P181-PWYNicotine degradation I (pyridine pathway)1176.0
P184-PWYProtocatechuate degradation I (meta-cleavage pathway)
Protocatechuate degradation via meta-cleavage
Protocatechuate 4,5-cleavage
1812.0
P185-PWYFormaldehyde assimilation III (dihydroxyacetone cycle)
Dihydroxyacetone cycle
Xylulose-monophosphate cycle
111292.0
P21-PWYPentose phosphate pathway (partial)
Pentose phosphate pathway, Mycoplasma pneumonia
33100.0
P221-PWYOctane oxidation3560.0
P224-PWYSulfate reduction V (dissimilatory, to thiosulfate)
Bisulfite reduction
2540.0
P23-PWYCarbon fixation
Reductive tricarboxylic acid cycle
Reductive tricarboxylic acid pathway
Reductive citric acid cycle
Reverse citric acid cycle
CO2 fixation
Reductive carboxylic acid cycle
Reductive TCA cycle I
101283.0
P241-PWYCoenzyme B biosynthesis
7-mecaptoheptanoylthreonine phosphate biosynthesis
CoB biosynthesis
1166.0
P281-PWY3-phenylpropanoate degradation
3-phenylpropionate degradation
3-phenylpropionic acid degradation
1911.0
P3-PWYGallate degradation III (anaerobic)1119.0
P341-PWYGlycolysis V (Pyrococcus)
Archaeal Embden-Meyerhof pathway
Archaeal Embden-Meyerhof-Parnas pathway
Archaeal EMP pathway
6967.0
P345-PWYAldoxime degradation
Aldoxime metabolism
1333.0
P42-PWYIncomplete reductive TCA cycle
Citric acid cycle variant
Tricarboxylic acid cycle variant
TCA cycle variation I
Incomplete reductive tricarboxylic acid cycle
5771.0
P541-PWYGlycine betaine biosynthesis IV (from glycine)
Betaine biosynthesis from glycine
2367.0
P562-PWYMyo-inositol degradation I1714.000000000000002
PANTO-PWYPhosphopantothenate biosynthesis I
Vitamin B5 biosynthesis
44100.0
PEPTIDOGLYCANSYN-PWYPeptidoglycan biosynthesis I (meso-diaminopimelate containing)3475.0
PHESYNL-phenylalanine biosynthesis I33100.0
PHOSLIPSYN2-PWYSuperpathway of phospholipid biosynthesis II (plants)
Phosphoglyceride biosynthesis
112348.0
PHOSPHONOTASE-PWY2-aminoethylphosphonate degradation I
Phosphonotase pathway
1333.0
PLPSAL-PWYPyridoxal 5'-phosphate salvage I
Vitamin B6 salvage I
55100.0
POLYAMINSYN3-PWYSuperpathway of polyamine biosynthesis II
Polyamn
4756.99999999999999
PPGPPMET-PWYPpGpp biosynthesis
Guanosine 3'-diphosphate 5'-diphosphate biosynthesis
3650.0
PROSYN-PWYL-proline biosynthesis I44100.0
PROUT-PWYL-proline degradation
L-proline utilization
1333.0
PWY-0Putrescine degradation III1425.0
PWY-1001Cellulose biosynthesis11100.0
PWY-101Photosynthesis light reactions44100.0
PWY-1042Glycolysis IV (plant cytosol)
Glycolysis 4
91090.0
PWY-1121Suberin monomers biosynthesis81942.0
PWY-1361Benzoyl-CoA degradation I (aerobic)2728.999999999999996
PWY-1422Vitamin E biosynthesis (tocopherols)
Tocopherol biosynthesis
5771.0
PWY-1501Mandelate degradation I1520.0
PWY-1581Plastoquinol-9 biosynthesis I
Plastoquinone biosynthesis I
Plastoquinone-9 biosynthesis I
Plastoquinol biosynthesis I
33100.0
PWY-1622Formaldehyde assimilation I (serine pathway)61346.0
PWY-1722Formate assimilation into 5,10-methylenetetrahydrofolate33100.0
PWY-1801Formaldehyde oxidation II (glutathione-dependent)
Formaldehyde oxidation II (GSH-dependent)
2367.0
PWY-181Photorespiration
C2 photorespiratory carbon oxidation cycle
PCO cycle
6967.0
PWY-1861Formaldehyde assimilation II (RuMP Cycle)
Ribulose monophosphate cycle
Formaldehyde assimilation
RuMP pathway
7978.0
PWY-2002Isoflavonoid biosynthesis I1520.0
PWY-2161Folate polyglutamylation55100.0
PWY-2181Free phenylpropanoid acid biosynthesis1425.0
PWY-2201Folate transformations I61250.0
PWY-2221Entner-Doudoroff pathway III (semi-phosphorylative)4944.0
PWY-2261Ascorbate glutathione cycle
Hydrogen peroxide detoxification
2450.0
PWY-2301Myo-inositol biosynthesis22100.0
PWY-241C4 photosynthetic carbon assimilation cycle, NADP-ME type
PCA cycle
C4 photosynthesis, NADP-ME type
55100.0
PWY-2501Fatty acid α-oxidation I
Fatty acid α-oxidation
1425.0
PWY-2541Plant sterol biosynthesis123633.0
PWY-2582Brassinosteroid biosynthesis II32114.000000000000002
PWY-2622Trehalose biosynthesis IV11100.0
PWY-2661Trehalose biosynthesis V1333.0
PWY-2721Trehalose degradation III1250.0
PWY-2722Trehalose degradation IV2367.0
PWY-2723Trehalose degradation V2367.0
PWY-2724Alkane oxidation
Fatty acid ω-oxidation
1617.0
PWY-2881Cytokinins 7-N-glucoside biosynthesis
Cytokinins conjugates biosynthesis
1714.000000000000002
PWY-2902Cytokinin-O-glucosides biosynthesis1425.0
PWY-2941L-lysine biosynthesis II6967.0
PWY-2942L-lysine biosynthesis III5771.0
PWY-3081L-lysine biosynthesis V11010.0
PWY-3101Flavonol biosynthesis1714.000000000000002
PWY-3121Linamarin degradation
Linamarin cyanogenesis
1250.0
PWY-3161Indole-3-acetate biosynthesis III (bacteria)
IAA biosynthesis III (bacteria)
1250.0
PWY-3162L-tryptophan degradation V (side chain pathway)21315.0
PWY-321Cutin biosynthesis
Cutin monomer biosynthesis
21612.0
PWY-3221DTDP-L-rhamnose biosynthesis II1333.0
PWY-3341L-proline biosynthesis III55100.0
PWY-3385Choline biosynthesis I1617.0
PWY-3461L-tyrosine biosynthesis II
Pretyrosine pathway
1333.0
PWY-3462L-phenylalanine biosynthesis II1333.0
PWY-3561Choline biosynthesis III1333.0
PWY-3581(S)-reticuline biosynthesis I21118.0
PWY-361Phenylpropanoid biosynthesis
Monolignol biosynthesis
Lignin biosynthesis
61540.0
PWY-3641L-carnitine degradation III2367.0
PWY-3661Glycine betaine degradation I2728.999999999999996
PWY-3661-1Glycine betaine degradation II (mammalian)1425.0
PWY-3722Glycine betaine biosynthesis II (Gram-positive bacteria)1250.0
PWY-3781Aerobic respiration I (cytochrome c)44100.0
PWY-3801Sucrose degradation II (sucrose synthase)4580.0
PWY-381Nitrate assimilation
Nitrate reduction II (assimilatory)
33100.0
PWY-3821D-galactose degradation III
UDP-D-galatose biosynthesis (from D-galactose)
33100.0
PWY-3841Folate transformations II81173.0
PWY-3861Mannitol degradation II1425.0
PWY-3881Mannitol biosynthesis2367.0
PWY-3941Β-alanine biosynthesis II
Β-alanine biosynthesis from proprionate
2633.0
PWY-3961Phosphopantothenate biosynthesis II1333.0
PWY-3981Β-alanine biosynthesis I
Β-alanine biosynthesis from polyamines
1250.0
PWY-3982Uracil degradation I (reductive)
Β-alanine biosynthesis
1333.0
PWY-401Galactolipid biosynthesis I
Galactosylglyceride biosynthesis I
2540.0
PWY-4041Γ-glutamyl cycle
Glutathione metabolism
5683.0
PWY-4061Glutathione-mediated detoxification I2540.0
PWY-4081Glutathione-peroxide redox reactions33100.0
PWY-4101D-sorbitol degradation I
Sorbitol utilization
2367.0
PWY-4202Arsenate detoxification I (glutaredoxin)1714.000000000000002
PWY-4261Glycerol degradation I1250.0
PWY-43Putrescine biosynthesis II1333.0
PWY-4302Aerobic respiration III (alternative oxidase pathway)
Alternative oxidase pathway
33100.0
PWY-4341L-glutamate biosynthesis V11100.0
PWY-4361S-methyl-5-thio-α-D-ribose 1-phosphate degradation2728.999999999999996
PWY-4381Fatty acid biosynthesis initiation I
De novo fatty acid biosynthesis, initial reactions
2367.0
PWY-4521Arsenite oxidation I (respiratory)1250.0
PWY-46Putrescine biosynthesis III
ODC pathway
11100.0
PWY-4621Arsenate detoxification II (glutaredoxin)22100.0
PWY-4661Phytate biosynthesis
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza)
Lipid-independent phytic acid biosynthesis
Lipid-independent InsP6 biosynthesis
Lipid-independent phytate biosynthesis
Hexakisphosphate biosynthesis (lipid-independent)
2728.999999999999996
PWY-4702Phytate degradation I21414.000000000000002
PWY-481Ethylbenzene degradation (anaerobic)
Anaerobic ethylbenzene oxidation
Anaerobic ethylbenzene degradation
2540.0
PWY-4821UDP-D-xylose biosynthesis
UDP-xylose biosynthesis
UDPXyl biosynthesis
2367.0
PWY-4942Sterculate biosynthesis
Cyclopropane and cyclopropene fatty acid biosynthesis
1250.0
PWY-4981L-proline biosynthesis II (from arginine)5683.0
PWY-4983L-citrulline-nitric oxide cycle
L-citrulline-NO cycle
Nitric oxide biosynthesis II
2367.0
PWY-4984Urea cycle
Krebs ornithine cycle
Krebs-Henseleit cycle
4580.0
PWY-5Canavanine biosynthesis3475.0
PWY-5022GABA degradation
4-aminobutanoate degradation V
1714.000000000000002
PWY-5025Indole-3-acetate biosynthesis IV (bacteria)
IAA biosynthesis IV (bacteria)
1250.0
PWY-5026Indole-3-acetate biosynthesis V (bacteria and fungi)
IAA biosynthesis V (bacteria and fungi)
11100.0
PWY-5028L-histidine degradation II1520.0
PWY-5030L-histidine degradation III2633.0
PWY-5033Nicotinate degradation II1520.0
PWY-5034GA12 biosynthesis
Gibberellin A12 biosynthesis
66100.0
PWY-5041S-adenosyl-L-methionine cycle II
Activated methyl cycle
SAM cycle
3475.0
PWY-50462-oxoisovalerate decarboxylation to isobutanoyl-CoA
2-oxo acid dehydrogenase complex
Branched-chain α-keto acid dehydrogenase complex
33100.0
PWY-5047Gibberellin biosynthesis IV (Gibberella fujikuroi)
GA3 biosynthesis
61540.0
PWY-5048Rosmarinic acid biosynthesis I1714.000000000000002
PWY-5054Sorbitol biosynthesis I1333.0
PWY-5057Ehrlich pathway
L-valine degradation II
33100.0
PWY-5059Pinobanksin biosynthesis2450.0
PWY-5060Luteolin biosynthesis1617.0
PWY-5063Phytyl diphosphate biosynthesis
Phytyl pyrophosphate biosynthesis
Phytyl-PP biosynthesis
33100.0
PWY-5064Chlorophyll a biosynthesis II55100.0
PWY-5067Glycogen biosynthesis II (from UDP-D-Glucose)2450.0
PWY-5068Chlorophyll cycle
Chlorophyll b biosynthesis
4756.99999999999999
PWY-5074Mevalonate degradation1250.0
PWY-5075L-leucine degradation II33100.0
PWY-5076Ehrlich pathway
L-leucine degradation III
33100.0
PWY-5078Ehrlich pathway
L-isoleucine degradation II
33100.0
PWY-5079Ehrlich pathway
L-phenylalanine degradation III
2450.0
PWY-5082L-methionine degradation III
Ehrlich pathway
1333.0
PWY-5083NAD/NADH phosphorylation and dephosphorylation4667.0
PWY-50842-oxoglutarate dehydrogenase complex
2-oxoglutarate decarboxylation to succinyl-CoA
2-ketoglutarate dehydrogenase complex
33100.0
PWY-5086Chlorophyll a biosynthesis I22100.0
PWY-5097L-lysine biosynthesis VI77100.0
PWY-5098Chlorophyll a degradation I1617.0
PWY-5101L-isoleucine biosynthesis II4850.0
PWY-5103L-isoleucine biosynthesis III4756.99999999999999
PWY-5104L-isoleucine biosynthesis IV3650.0
PWY-5107Phytol salvage pathway
Phytyl-PP biosynthesis (from phytol)
Phytyl-diphosphate biosynthesis (from phytol)
1250.0
PWY-5108L-isoleucine biosynthesis V2367.0
PWY-51092-methylbutanoate biosynthesis
2-methylbutyrate biosynthesis
2633.0
PWY-5115GDP-L-galactose biosynthesis1250.0
PWY-5120Geranylgeranyl diphosphate biosynthesis
GGPP biosynthesis
11100.0
PWY-5122Geranyl diphosphate biosynthesis
GPP biosynthesis
11100.0
PWY-5123Trans, trans-farnesyl diphosphate biosynthesis
FPP biosynthesis
33100.0
PWY-5129Sphingolipid biosynthesis (plants)
Ceramide biosynthesis (plants)
31323.0
PWY-51302-oxobutanoate degradation I
2-oxobutyrate catabolism
2-oxobutyrate degradation
1333.0
PWY-5132Humulone biosynthesis
Bitter α-acid (humulone) biosynthesis
2633.0
PWY-5133Cohumulone biosynthesis
Bitter α-acid (cohumulone) biosynthesis
1617.0
PWY-5135Xanthohumol biosynthesis2450.0
PWY-5136Fatty acid β-oxidation II (peroxisome)
Fatty acid β-oxidation II (plants)
55100.0
PWY-5137Fatty acid β-oxidation III (unsaturated, odd number)11100.0
PWY-5138Unsaturated, even numbered fatty acid β-oxidation
Fatty acid β-oxidation IV (unsaturated, even number)
3560.0
PWY-5139Pelargonidin conjugates biosynthesis1617.0