RXN-15561
Revision as of 10:46, 15 June 2021 by Bot 1 (talk | contribs) (Created page with "Category:reaction == Reaction RXN-15561 == * common-name: ** ring-type e3 ubiquitin transferase * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/...")
Contents
Reaction RXN-15561
- common-name:
- ring-type e3 ubiquitin transferase
- direction:
- left-to-right
- ec-number:
Reaction formula
- 1 Protein-L-lysine[c] + 1 S-ubiquitinyl-UCP-E2-L-cysteine[c] => 1 PROTEIN-N-UBIQUITYL-LYSINE[c] + 1 PROTON[c] + 1 Ubiquitin-carrier-protein-E2-L-cysteine[c]
Gene(s) associated with this reaction
- Gene: g12516.t1
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: g9336.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g5858.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g6581.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g18144.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g9159.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g3555.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g8131.t1
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: g11857.t1
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: g18030.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g8043.t2
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g7651.t1
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: g8824.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g17042.t2
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g17042.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g11708.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g14659.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g9969.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g12682.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g12881.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g6797.t2
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g10583.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g4118.t2
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g12596.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g3445.t2
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g3445.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g15511.t1
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: g11203.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g6593.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g7706.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g9378.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g10408.t1
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: g8780.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g16055.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g11070.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g3903.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g8780.t3
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g4538.t2
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g8151.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g18336.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g6797.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g4118.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g4538.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g11006.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g12664.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g4965.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g4118.t3
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g7587.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g16057.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g11762.t1
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: g11773.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g12602.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g6242.t2
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g8780.t2
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g4150.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g14973.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g18143.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g7016.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g4415.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g12881.t2
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g7706.t2
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g13002.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g8028.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g10408.t2
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: g4966.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g12320.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g3901.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g7381.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g6830.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g16080.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g13002.t2
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g6242.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g9909.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g6560.t1
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: g8043.t3
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: g9430.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g9431.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: g10395.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g5761.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g8708.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g8043.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: g17557.t1
- Category: annotation
- Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-7511, protein ubiquitination:
- 7 reactions found over 9 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_saccharina_japonica; tool: pantograph; comment: n.a
- category: annotation; source: cladosiphon_okamuranus; tool: pathwaytools; comment: n.a
External links
- METANETX-RXN : MNXR119450