Difference between revisions of "2.1.1.138-RXN"
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(Created page with "Category:reaction == Reaction SULFITE-REDUCTASE-RXN == * direction: ** reversible * ec_number: ** ec-1.8.99.5 == Reaction formula == * 2 Acceptor[c] '''+''' 1 DsrC-d...") |
(Created page with "Category:reaction == Reaction RXN-9535 == * common-name: ** 3-oxoacyl-[acyl-carrier-protein] synthase ** β-ketomeristoyl-[acp] synthase * ec-number: ** [http://enzyme...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction RXN-9535 == |
+ | * common-name: | ||
+ | ** 3-oxoacyl-[acyl-carrier-protein] synthase | ||
+ | ** β-ketomeristoyl-[acp] synthase | ||
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179] | ||
+ | ** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41] | ||
+ | ** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85] | ||
+ | ** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86] | ||
* direction: | * direction: | ||
− | ** | + | ** left-to-right |
− | * | + | * synonymous: |
− | ** | + | ** β-ketoacyl-acp synthase i |
+ | ** β-ketoacyl-acyl carrier protein synthetase | ||
+ | ** β-ketoacyl acyl carrier protein synthase | ||
+ | ** 3-oxoacyl-[acyl-carrier-protein] synthase | ||
+ | ** condensing enzyme | ||
+ | ** β-ketoacyl-[acyl carrier protein] synthase | ||
+ | ** acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] c-acyltransferase (decarboxylating) | ||
== Reaction formula == | == Reaction formula == | ||
− | * | + | * 1 [[Dodecanoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-myristoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | ** Category: [[ | + | * Gene: [[E_subulatus_22265]] |
− | *** Source: [[ | + | ** Category: [[annotation]] |
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_15038]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_13006]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[E_subulatus_15037]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_08948]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[E_subulatus_13004]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_22266]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_13005]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | *** Source: [[ | + | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
− | + | ** '''30''' reactions found over '''31''' reactions in the full pathway | |
− | |||
− | ** ''' | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[ | + | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a |
+ | * category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | + | {{#set: common-name=β-ketomeristoyl-[acp] synthase|3-oxoacyl-[acyl-carrier-protein] synthase}} | |
− | + | {{#set: ec-number=ec-2.3.1.179|ec-2.3.1.86|ec-2.3.1.85|ec-2.3.1.41}} | |
− | {{#set: direction= | + | {{#set: direction=left-to-right}} |
− | {{#set: | + | {{#set: synonymous=β-ketoacyl-acyl carrier protein synthetase|β-ketoacyl acyl carrier protein synthase|3-oxoacyl-[acyl-carrier-protein] synthase|β-ketoacyl-acp synthase i|condensing enzyme|β-ketoacyl-[acyl carrier protein] synthase|acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] c-acyltransferase (decarboxylating)}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=8}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
− | {{#set: reconstruction category= | + | {{#set: reconstruction category=annotation|orthology}} |
− | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
− | {{#set: reconstruction comment= | + | {{#set: reconstruction comment=n.a}} |
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}} |
Revision as of 18:03, 13 January 2021
Contents
Reaction RXN-9535
- common-name:
- 3-oxoacyl-[acyl-carrier-protein] synthase
- β-ketomeristoyl-[acp] synthase
- ec-number:
- direction:
- left-to-right
- synonymous:
- β-ketoacyl-acp synthase i
- β-ketoacyl-acyl carrier protein synthetase
- β-ketoacyl acyl carrier protein synthase
- 3-oxoacyl-[acyl-carrier-protein] synthase
- condensing enzyme
- β-ketoacyl-[acyl carrier protein] synthase
- acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] c-acyltransferase (decarboxylating)
Reaction formula
- 1 Dodecanoyl-ACPs[c] + 1 MALONYL-ACP[c] + 1 PROTON[c] => 1 3-oxo-myristoyl-ACPs[c] + 1 ACP[c] + 1 CARBON-DIOXIDE[c]
Gene(s) associated with this reaction
- Gene: E_subulatus_22265
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_15038
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_13006
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: E_subulatus_15037
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_08948
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: E_subulatus_13004
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_22266
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_13005
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- 30 reactions found over 31 reactions in the full pathway
Reconstruction information
- category: annotation; source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_a.taliana.aragem; tool: pantograph; comment: n.a
External links
- Property "Common-name" (as page type) with input value "β-ketomeristoyl-[acp] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
- Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
- Property "Synonymous" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
- Property "Synonymous" (as page type) with input value "β-ketoacyl-[acyl carrier protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
- Property "Synonymous" (as page type) with input value "acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] c-acyltransferase (decarboxylating)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.