Difference between revisions of "RXN-12196"

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(Created page with "Category:reaction == Reaction DNA-LIGASE-ATP-RXN == * common-name: ** dna ligase (atp) * ec-number: ** [http://enzyme.expasy.org/EC/6.5.1.7 ec-6.5.1.7] ** [http://enzyme.e...")
(Created page with "Category:reaction == Reaction SORBITOL-6-PHOSPHATASE-RXN == * direction: ** left-to-right * ec_number: ** ec-3.1.3.50 == Reaction formula == * 1 D-SORBITOL-6-P[c] '''+...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction DNA-LIGASE-ATP-RXN ==
+
== Reaction SORBITOL-6-PHOSPHATASE-RXN ==
* common-name:
 
** dna ligase (atp)
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/6.5.1.7 ec-6.5.1.7]
 
** [http://enzyme.expasy.org/EC/6.5.1.1 ec-6.5.1.1]
 
** [http://enzyme.expasy.org/EC/6.5.1.6 ec-6.5.1.6]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* ec_number:
 +
** ec-3.1.3.50
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[3-Hydroxy-Terminated-DNAs]][c] '''+''' 1 [[5-Phospho-terminated-DNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[DNA-N]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[D-SORBITOL-6-P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[SORBITOL]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[E_subulatus_16239]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_16238]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_02446]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_18782]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5054]], D-sorbitol biosynthesis I:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
 
== External links  ==
 
== External links  ==
* DB : UNIPROT
+
* METANETX-RXN : MNXR107787
* ID : P12000
+
* RHEA:
{{#set: common-name=dna ligase (atp)}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24581 24581]
{{#set: ec-number=ec-6.5.1.1|ec-6.5.1.7|ec-6.5.1.6}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02866 R02866]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: nb gene associated=4}}
+
{{#set: ec_number=ec-3.1.3.50}}
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=0}}
{{#set: reconstruction category=annotation}}
+
{{#set: nb pathway associated=1}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction comment=annotation}}
 +
{{#set: reconstruction source=esub_adding_annot_form}}

Revision as of 15:18, 15 March 2021

Reaction SORBITOL-6-PHOSPHATASE-RXN

  • direction:
    • left-to-right
  • ec_number:
    • ec-3.1.3.50

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5054, D-sorbitol biosynthesis I:
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR107787
  • RHEA:
  • LIGAND-RXN: