Difference between revisions of "2.1.1.100-RXN"

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(Created page with "Category:reaction == Reaction FARNESYLTRANSTRANSFERASE-RXN == * common-name: ** geranylgeranyl diphosphate synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.29 e...")
(Created page with "Category:reaction == Reaction RXN1G-3256 == * common-name: ** trans-δ18-37-hydroxy-38-methyl-c58:1-[acp] reductase ** enoyl-[acyl-carrier-protein] reductase * ec-num...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction FARNESYLTRANSTRANSFERASE-RXN ==
+
== Reaction RXN1G-3256 ==
 
* common-name:
 
* common-name:
−
** geranylgeranyl diphosphate synthase
+
** trans-δ18-37-hydroxy-38-methyl-c58:1-[acp] reductase
 +
** enoyl-[acyl-carrier-protein] reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.29 ec-2.5.1.29]
+
** [http://enzyme.expasy.org/EC/2.1.1 ec-2.1.1]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[FARNESYL-PP]][c] '''=>''' 1 [[GERANYLGERANYL-PP]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[trans-D18-37-MOH-38-Me-C58-1-ACPs]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[trans-18-CP-37-Mex-38-Me-C60-ACPs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[E_subulatus_16468]]
−
* Gene: [[E_subulatus_14924]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_18294]]
+
* Gene: [[E_subulatus_24601]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_18225]]
+
* Gene: [[E_subulatus_16469]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_14926]]
+
* Gene: [[E_subulatus_16466]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_14923]]
+
* Gene: [[E_subulatus_16467]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_00014]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_14925]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_01843]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7492]], paspaline biosynthesis:
+
* [[PWYG-321]], mycolate biosynthesis:
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''43''' reactions found over '''205''' reactions in the full pathway
−
* [[PWY-7721]], methyl phomopsenoate biosynthesis:
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7517]], brassicicene C biosynthesis:
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6691]], plaunotol biosynthesis:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5120]], geranylgeranyl diphosphate biosynthesis:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-7720]], ophiobolin F biosynthesis:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6659]], fusicoccin A biosynthesis:
 
−
** '''1''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7736]], stellatic acid biosynthesis:
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR99650
+
* METANETX-RXN : MNXR123542
−
* RHEA:
+
{{#set: common-name=trans-&delta;18-37-hydroxy-38-methyl-c58:1-[acp] reductase|enoyl-[acyl-carrier-protein] reductase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17654 17654]
+
{{#set: ec-number=ec-2.1.1}}
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02061 R02061]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P39464 P39464]
 
−
** [http://www.uniprot.org/uniprot/P24322 P24322]
 
−
** [http://www.uniprot.org/uniprot/P80042 P80042]
 
−
** [http://www.uniprot.org/uniprot/Q12051 Q12051]
 
−
** [http://www.uniprot.org/uniprot/P95999 P95999]
 
−
** [http://www.uniprot.org/uniprot/P48368 P48368]
 
−
** [http://www.uniprot.org/uniprot/P93227 P93227]
 
−
** [http://www.uniprot.org/uniprot/P93228 P93228]
 
−
** [http://www.uniprot.org/uniprot/Q42698 Q42698]
 
−
** [http://www.uniprot.org/uniprot/Q43133 Q43133]
 
−
** [http://www.uniprot.org/uniprot/Q42866 Q42866]
 
−
** [http://www.uniprot.org/uniprot/P54976 P54976]
 
−
{{#set: common-name=geranylgeranyl diphosphate synthase}}
 
−
{{#set: ec-number=ec-2.5.1.29}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=8}}
+
{{#set: nb gene associated=5}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 19:05, 17 March 2021

Reaction RXN1G-3256

  • common-name:
    • trans-δ18-37-hydroxy-38-methyl-c58:1-[acp] reductase
    • enoyl-[acyl-carrier-protein] reductase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWYG-321, mycolate biosynthesis:
    • 43 reactions found over 205 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR123542
  • Property "Common-name" (as page type) with input value "trans-δ18-37-hydroxy-38-methyl-c58:1-[acp] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "enoyl-[acyl-carrier-protein] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.





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