Difference between revisions of "HOMOACONITATE-HYDRATASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-12090 == * common-name: ** n1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming) * ec-number: ** [http://enzyme.expasy....")
(Created page with "Category:reaction == Reaction HOMOACONITATE-HYDRATASE-RXN == * direction: ** left-to-right * ec_number: ** ec-4.2.1.36 == Reaction formula == * 1 HOMO-CIS-ACONITATE[c]...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-12090 ==
+
== Reaction HOMOACONITATE-HYDRATASE-RXN ==
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* common-name:
 
−
** n1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming)
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/1.5.3.17 ec-1.5.3.17]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* ec_number:
 +
** ec-4.2.1.36
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[N1-ACETYLSPERMINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-10687]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[SPERMIDINE]][c]
+
* 1 [[HOMO-CIS-ACONITATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[HOMO-I-CIT]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[EsuBft399_5a]]
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* Gene: [[E_subulatus_12936]]
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** Category: [[manual]]
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** Category: [[annotation]]
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*** Source: [[esub_adding_annot_form]], Tool: [[unknown-tool]], Assignment: n.a, Comment: annotation
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_18411]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_18405]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_17393]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_20664]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_18629]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_03592]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_05915]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_17392]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[P241-PWY]], coenzyme B biosynthesis:
 +
** '''2''' reactions found over '''16''' reactions in the full pathway
 +
* [[LYSINE-AMINOAD-PWY]], L-lysine biosynthesis IV:
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-3081]], L-lysine biosynthesis V:
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR100552
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25801 25801]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15488 15488]
−
{{#set: common-name=n1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming)}}
+
* LIGAND-RXN:
−
{{#set: ec-number=ec-1.5.3.17}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04371 R04371]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q58409 Q58409]
 +
** [http://www.uniprot.org/uniprot/P49367 P49367]
 +
** [http://www.uniprot.org/uniprot/Q9UT74 Q9UT74]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=9}}
+
{{#set: ec_number=ec-4.2.1.36}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction comment=annotation}}
 +
{{#set: reconstruction source=esub_adding_annot_form}}

Latest revision as of 19:37, 17 March 2021

Reaction HOMOACONITATE-HYDRATASE-RXN

  • direction:
    • left-to-right
  • ec_number:
    • ec-4.2.1.36

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • P241-PWY, coenzyme B biosynthesis:
    • 2 reactions found over 16 reactions in the full pathway
  • LYSINE-AMINOAD-PWY, L-lysine biosynthesis IV:
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-3081, L-lysine biosynthesis V:
    • 2 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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