Difference between revisions of "2.4.1.149-RXN"

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(Created page with "Category:reaction == Reaction RXN-7913 == * common-name: ** dcmp kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.4.25 ec-2.7.4.25] ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:reaction == Reaction 2.4.1.149-RXN == * direction: ** left-to-right * ec_number: ** ec-2.4.1.149 == Reaction formula == * 1 B-Gal-14-NacGlc-R[c] '''+''' 1 U...")
 
(2 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-7913 ==
+
== Reaction 2.4.1.149-RXN ==
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* common-name:
 
−
** dcmp kinase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.7.4.25 ec-2.7.4.25]
 
−
** [http://enzyme.expasy.org/EC/2.7.4.14 ec-2.7.4.14]
 
−
** [http://enzyme.expasy.org/EC/2.7.4.13 ec-2.7.4.13]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* ec_number:
 +
** ec-2.4.1.149
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[DCMP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DCDP]][c]
+
* 1 [[B-Gal-14-NacGlc-R]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''=>''' 1 [[N-ACETYL-BETA-D-GLUCOSAMINYL-13-ETCETERA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* Gene: [[E_subulatus_19892]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[E_subulatus_13580]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_13577]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_19894]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_19893]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_13579]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_03631]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_13578]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[PWY-7434]], terminal O-glycans residues modification (via type 2 precursor disaccharide):
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''10''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* DB : RHEA
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* METANETX-RXN : MNXR115103
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* ID : 25094
+
* RHEA:
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{{#set: common-name=dcmp kinase}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14390 14390]
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{{#set: ec-number=ec-2.7.4.13|ec-2.7.4.14|ec-2.7.4.25}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02789 R02789]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=8}}
+
{{#set: ec_number=ec-2.4.1.149}}
 +
{{#set: nb gene associated=0}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=curation}}
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{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=annotation}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
+
{{#set: reconstruction source=esub_adding_annot_form}}

Latest revision as of 19:37, 17 March 2021

Reaction 2.4.1.149-RXN

  • direction:
    • left-to-right
  • ec_number:
    • ec-2.4.1.149

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7434, terminal O-glycans residues modification (via type 2 precursor disaccharide):
    • 10 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR115103
  • RHEA:
  • LIGAND-RXN:





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