Difference between revisions of "2.3.1.176-RXN"

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(Created page with "Category:reaction == Reaction RNA-LIGASE-ATP-RXN == * common-name: ** rna ligase (atp) * ec-number: ** [http://enzyme.expasy.org/EC/6.5.1.3 ec-6.5.1.3] * direction: ** lef...")
 
(Created page with "Category:reaction == Reaction 2.3.1.176-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.176 ec-2.3.1.176] * direction: ** left-to-right == Reaction formula == *...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RNA-LIGASE-ATP-RXN ==
+
== Reaction 2.3.1.176-RXN ==
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* common-name:
 
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** rna ligase (atp)
 
 
* ec-number:
 
* ec-number:
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** [http://enzyme.expasy.org/EC/6.5.1.3 ec-6.5.1.3]
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** [http://enzyme.expasy.org/EC/2.3.1.176 ec-2.3.1.176]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[3Prime-OH-Terminated-RNAs]][c] '''+''' 1 [[5-Phospho-RNA]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[RNA-Holder]][c]
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* 1 [[CO-A]][c] '''+''' 1 [[CPD-7257]][c] '''=>''' 1 [[CPD-202]][c] '''+''' 1 [[PROPIONYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[E_subulatus_21195]]
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* Gene: [[E_subulatus_23204]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[E_subulatus_21194]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6061]], bile acid biosynthesis, neutral pathway:
 +
** '''1''' reactions found over '''29''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
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* DB : LIGAND-RXN
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* METANETX-RXN : MNXR108369
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* ID : R07640
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* RHEA:
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{{#set: common-name=rna ligase (atp)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16865 16865]
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{{#set: ec-number=ec-6.5.1.3}}
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* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03719 R03719]
 +
{{#set: ec-number=ec-2.3.1.176}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: nb gene associated=2}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=0}}
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{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}

Latest revision as of 19:39, 17 March 2021

Reaction 2.3.1.176-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6061, bile acid biosynthesis, neutral pathway:
    • 1 reactions found over 29 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR108369
  • RHEA:
  • LIGAND-RXN:





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