Difference between revisions of "3.1.27.9-RXN"
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(Created page with "Category:reaction == Reaction RXN1G-2527 == * common-name: ** cis,cis-δ19-37-c56:2-[acp] methyltransferase-hydroxylase ** enoyl-[acyl-carrier-protein] reductase * ec...") |
(Created page with "Category:reaction == Reaction 3.1.27.9-RXN == * common-name: ** trna-intron endonuclease * ec-number: ** [http://enzyme.expasy.org/EC/4.6.1.16 ec-4.6.1.16] * direction: **...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction 3.1.27.9-RXN == |
* common-name: | * common-name: | ||
| − | ** | + | ** trna-intron endonuclease |
| − | |||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/4.6.1.16 ec-4.6.1.16] |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[CPD0-2350]][c] '''=>''' 1 [[Pre-tRNA-3-prime-half-molecules]][c] '''+''' 1 [[Pre-tRNA-5-prime-half-molecules]][c] '''+''' 1 [[tRNA-Introns]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[E_subulatus_08301]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
| − | * Gene: [[ | + | * Gene: [[E_subulatus_08300]] |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[ | + | * [[PWY-6689]], tRNA splicing I: |
| − | ** ''' | + | ** '''5''' reactions found over '''7''' reactions in the full pathway |
| + | * [[PWY-7803]], tRNA splicing II: | ||
| + | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| − | * METANETX-RXN : | + | * METANETX-RXN : MNXR115290 |
| − | {{#set: common-name= | + | * UNIPROT: |
| − | {{#set: ec-number=ec- | + | ** [http://www.uniprot.org/uniprot/O07118 O07118] |
| + | {{#set: common-name=trna-intron endonuclease}} | ||
| + | {{#set: ec-number=ec-4.6.1.16}} | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=ectocarpus_subulatus}} | {{#set: reconstruction source=ectocarpus_subulatus}} | ||
Latest revision as of 19:39, 17 March 2021
Contents
Reaction 3.1.27.9-RXN
- common-name:
- trna-intron endonuclease
- ec-number:
- direction:
- left-to-right
Reaction formula
- 1 CPD0-2350[c] => 1 Pre-tRNA-3-prime-half-molecules[c] + 1 Pre-tRNA-5-prime-half-molecules[c] + 1 tRNA-Introns[c]
Gene(s) associated with this reaction
- Gene: E_subulatus_08301
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: E_subulatus_08300
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6689, tRNA splicing I:
- 5 reactions found over 7 reactions in the full pathway
- PWY-7803, tRNA splicing II:
- 1 reactions found over 2 reactions in the full pathway
Reconstruction information
- category: annotation; source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
External links
- METANETX-RXN : MNXR115290
- UNIPROT:
