Difference between revisions of "GAPOXNPHOSPHN-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-12400 == * common-name: ** xyloglucan xllg oligosaccharide β-galactosidase ** beta-galactosidase ** xllg xyloglucan oligosaccharide...")
(Created page with "Category:reaction == Reaction RXN-6383 == * common-name: ** 3-hydroxypropionyl-coa dehydratase * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.116 ec-4.2.1.116] * direc...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-12400 ==
+
== Reaction RXN-6383 ==
 
* common-name:
 
* common-name:
−
** xyloglucan xllg oligosaccharide β-galactosidase
+
** 3-hydroxypropionyl-coa dehydratase
−
** beta-galactosidase
 
−
** xllg xyloglucan oligosaccharide β-galactosidase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.2.1.23 ec-3.2.1.23]
+
** [http://enzyme.expasy.org/EC/4.2.1.116 ec-4.2.1.116]
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-13378]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[CPD-13375]][c] '''+''' 2 [[D-galactopyranose]][c]
+
* 1 [[3-HYDROXY-PROPIONYL-COA]][c] '''<=>''' 1 [[ACRYLYL-COA]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_00876]]
+
* Gene: [[E_subulatus_13806]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_14853]]
+
* Gene: [[E_subulatus_13805]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_07881]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_02116]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_13807]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_00877]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_18607]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_14852]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6807]], xyloglucan degradation II (exoglucanase):
+
* [[PWY-5743]], 3-hydroxypropanoate cycle:
−
** '''3''' reactions found over '''8''' reactions in the full pathway
+
** '''6''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle:
 +
** '''9''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-5744]], glyoxylate assimilation:
 +
** '''3''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-3941]], &beta;-alanine biosynthesis II:
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7574]], propanoyl-CoA degradation II:
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR117528
+
* METANETX-RXN : MNXR100691
−
{{#set: common-name=xyloglucan xllg oligosaccharide &beta;-galactosidase|beta-galactosidase|xllg xyloglucan oligosaccharide &beta;-galactosidase}}
+
* RHEA:
−
{{#set: ec-number=ec-3.2.1.23}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26518 26518]
−
{{#set: direction=left-to-right}}
+
* LIGAND-RXN:
−
{{#set: nb gene associated=6}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03045 R03045]
−
{{#set: nb pathway associated=1}}
+
{{#set: common-name=3-hydroxypropionyl-coa dehydratase}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: ec-number=ec-4.2.1.116}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: direction=reversible}}
 +
{{#set: nb gene associated=4}}
 +
{{#set: nb pathway associated=5}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Revision as of 19:06, 17 March 2021

Reaction RXN-6383

  • common-name:
    • 3-hydroxypropionyl-coa dehydratase
  • ec-number:
  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5743, 3-hydroxypropanoate cycle:
    • 6 reactions found over 13 reactions in the full pathway
  • PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle:
    • 9 reactions found over 18 reactions in the full pathway
  • PWY-5744, glyoxylate assimilation:
    • 3 reactions found over 13 reactions in the full pathway
  • PWY-3941, β-alanine biosynthesis II:
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-7574, propanoyl-CoA degradation II:
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR100691
  • RHEA:
  • LIGAND-RXN:





Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=GAPOXNPHOSPHN-RXN&oldid=40994"