Difference between revisions of "3.5.1.26-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-7677 == * common-name: ** 71-hydroxychlorophyllide a monooxygenase ** chlorophyllide a oxygenase [overall] * direction: ** left-to-right...")
(Created page with "Category:reaction == Reaction GLUTAMATE-SYNTHASE-FERREDOXIN-RXN == * common-name: ** glutamate synthase (ferredoxin) * ec-number: ** [http://enzyme.expasy.org/EC/1.4.7.1 e...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-7677 ==
+
== Reaction GLUTAMATE-SYNTHASE-FERREDOXIN-RXN ==
 
* common-name:
 
* common-name:
−
** 71-hydroxychlorophyllide a monooxygenase
+
** glutamate synthase (ferredoxin)
−
** chlorophyllide a oxygenase [overall]
+
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.4.7.1 ec-1.4.7.1]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* synonymous:
 
−
** cao
 
−
** chlorophyllide a oxygenase
 
−
** chlorophyll-b synthase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-7015]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-19759]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[GLN]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 2 [[GLT]][c] '''+''' 2 [[Oxidized-ferredoxins]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[E_subulatus_17838]]
−
* Gene: [[E_subulatus_07455]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
* Gene: [[E_subulatus_13550]]
−
* Gene: [[E_subulatus_12890]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_20083]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_06698]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_07456]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_15638]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_14078]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_03342]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_15639]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_16061]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_12888]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_14079]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_16615]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_16614]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_03343]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_12889]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5068]], chlorophyll cycle:
+
* [[PWY-4341]], L-glutamate biosynthesis V:
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-6549]], L-glutamine biosynthesis III:
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6964]], ammonia assimilation cycle II:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR111774
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR100245
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22137 22137]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12130 12130]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08204 R08204]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00021 R00021]
−
{{#set: common-name=chlorophyllide a oxygenase [overall]|71-hydroxychlorophyllide a monooxygenase}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P23225 P23225]
 +
** [http://www.uniprot.org/uniprot/O67512 O67512]
 +
** [http://www.uniprot.org/uniprot/P96218 P96218]
 +
** [http://www.uniprot.org/uniprot/Q06434 Q06434]
 +
** [http://www.uniprot.org/uniprot/Q43081 Q43081]
 +
** [http://www.uniprot.org/uniprot/P55037 P55037]
 +
** [http://www.uniprot.org/uniprot/Q43155 Q43155]
 +
** [http://www.uniprot.org/uniprot/Q7M242 Q7M242]
 +
** [http://www.uniprot.org/uniprot/P51375 P51375]
 +
** [http://www.uniprot.org/uniprot/P55038 P55038]
 +
** [http://www.uniprot.org/uniprot/Q9SLM4 Q9SLM4]
 +
** [http://www.uniprot.org/uniprot/Q08258 Q08258]
 +
** [http://www.uniprot.org/uniprot/O49154 O49154]
 +
** [http://www.uniprot.org/uniprot/O19906 O19906]
 +
</div>
 +
{{#set: common-name=glutamate synthase (ferredoxin)}}
 +
{{#set: ec-number=ec-1.4.7.1}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: synonymous=cao|chlorophyllide a oxygenase|chlorophyll-b synthase}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=16}}
+
{{#set: nb pathway associated=3}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Revision as of 19:07, 17 March 2021

Reaction GLUTAMATE-SYNTHASE-FERREDOXIN-RXN

  • common-name:
    • glutamate synthase (ferredoxin)
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-4341, L-glutamate biosynthesis V:
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6549, L-glutamine biosynthesis III:
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-6964, ammonia assimilation cycle II:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=3.5.1.26-RXN&oldid=41285"