Difference between revisions of "E subulatus 22240"
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(Created page with "Category:gene == Gene E_subulatus_16931 == * transcription-direction: ** negative * centisome-position: ** 62.57342 * left-end-position: ** 199852 * right-end-position...") |
(Created page with "Category:gene == Gene E_subulatus_22240 == * transcription-direction: ** positive * centisome-position: ** 36.018723 * left-end-position: ** 44325 * right-end-position...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene E_subulatus_22240 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** positive |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 36.018723 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 44325 |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 54058 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[E_subulatus_sterols]] | * [[E_subulatus_sterols]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[CYSTATHIONINE-BETA-LYASE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | ||
− | {{#set: transcription-direction= | + | * [[METBALT-RXN]] |
− | {{#set: centisome-position= | + | ** Category: [[orthology]] |
− | {{#set: left-end-position= | + | *** source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a |
− | {{#set: right-end-position= | + | * [[O-SUCCHOMOSERLYASE-RXN]] |
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[RXN-12729]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-15131]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-15137]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[SULFOCYS-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a | ||
+ | </div> | ||
+ | == Pathway(s) associated == | ||
+ | * [[PWY-801]] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-I9]] | ||
+ | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[HOMOSER-METSYN-PWY]] | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6936]] | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-702]] | ||
+ | ** '''4''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-7870]] | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | {{#set: transcription-direction=positive}} | ||
+ | {{#set: centisome-position=36.018723 }} | ||
+ | {{#set: left-end-position=44325}} | ||
+ | {{#set: right-end-position=54058}} | ||
{{#set: organism associated=E_subulatus_sterols}} | {{#set: organism associated=E_subulatus_sterols}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=7}} |
+ | {{#set: nb pathway associated=6}} |
Latest revision as of 19:23, 17 March 2021
Contents
Gene E_subulatus_22240
- transcription-direction:
- positive
- centisome-position:
- 36.018723
- left-end-position:
- 44325
- right-end-position:
- 54058
Organism(s) associated with this gene
Reaction(s) associated
- CYSTATHIONINE-BETA-LYASE-RXN
- Category: annotation
- source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
- Category: annotation
- METBALT-RXN
- Category: orthology
- source: output_pantograph_a.taliana.aragem; tool: pantograph; comment: n.a
- Category: orthology
- O-SUCCHOMOSERLYASE-RXN
- Category: orthology
- source: output_pantograph_a.taliana.aragem; tool: pantograph; comment: n.a
- Category: orthology
- RXN-12729
- Category: annotation
- source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-15131
- Category: annotation
- source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-15137
- Category: annotation
- source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
- Category: annotation
- SULFOCYS-RXN
- Category: orthology
- source: output_pantograph_a.taliana.aragem; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-801
- 4 reactions found over 4 reactions in the full pathway
- PWY-I9
- 3 reactions found over 5 reactions in the full pathway
- HOMOSER-METSYN-PWY
- 5 reactions found over 5 reactions in the full pathway
- PWY-6936
- 4 reactions found over 5 reactions in the full pathway
- PWY-702
- 4 reactions found over 6 reactions in the full pathway
- PWY-7870
- 2 reactions found over 4 reactions in the full pathway