Difference between revisions of "RXN-8032"

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(Created page with "Category:reaction == Reaction RXN0-3542 == * ec-number: ** [http://enzyme.expasy.org/EC/3.6.1 ec-3.6.1] * direction: ** reversible == Reaction formula == * 1 THIAMINE-PY...")
(Created page with "Category:reaction == Reaction RXN-8032 == * common-name: ** 3-ketopimelyl-coa thiolase * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1] * direction: ** reversi...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN0-3542 ==
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== Reaction RXN-8032 ==
 +
* common-name:
 +
** 3-ketopimelyl-coa thiolase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.6.1 ec-3.6.1]
+
** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1]
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[THIAMINE-PYROPHOSPHATE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[THIAMINE-P]][c]
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* 1 [[3-OXOPIMELOYL-COA]][c] '''+''' 1 [[CO-A]][c] '''<=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[GLUTARYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[E_subulatus_06847]]
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* Gene: [[E_subulatus_24809]]
** Category: [[orthology]]
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** Category: [[annotation]]
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[CENTBENZCOA-PWY]], benzoyl-CoA degradation II (anaerobic):
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate):
 +
** '''4''' reactions found over '''15''' reactions in the full pathway
 +
* [[P321-PWY]], benzoyl-CoA degradation III (anaerobic):
 +
** '''1''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* METANETX-RXN : MNXR104756
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* METANETX-RXN : MNXR102157
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28001 28001]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R00615 R00615]
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** [http://www.genome.jp/dbget-bin/www_bget?R05586 R05586]
{{#set: ec-number=ec-3.6.1}}
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{{#set: common-name=3-ketopimelyl-coa thiolase}}
 +
{{#set: ec-number=ec-2.3.1}}
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=0}}
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{{#set: nb pathway associated=3}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:37, 17 March 2021

Reaction RXN-8032

  • common-name:
    • 3-ketopimelyl-coa thiolase
  • ec-number:
  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • CENTBENZCOA-PWY, benzoyl-CoA degradation II (anaerobic):
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-7401, crotonate fermentation (to acetate and cyclohexane carboxylate):
    • 4 reactions found over 15 reactions in the full pathway
  • P321-PWY, benzoyl-CoA degradation III (anaerobic):
    • 1 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR102157
  • LIGAND-RXN: