Difference between revisions of "RXN0-949"

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(Created page with "Category:reaction == Reaction RXN-527 == * common-name: ** quercetin synthase * ec-number: ** [http://enzyme.expasy.org/EC/1.14.20.6 ec-1.14.20.6] * direction: ** left-to-...")
(Created page with "Category:reaction == Reaction RXN0-949 == * common-name: ** lipoyl synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.8.1.8 ec-2.8.1.8] * direction: ** left-to-right...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-527 ==
+
== Reaction RXN0-949 ==
 
* common-name:
 
* common-name:
−
** quercetin synthase
+
** lipoyl synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.20.6 ec-1.14.20.6]
+
** [http://enzyme.expasy.org/EC/2.8.1.8 ec-2.8.1.8]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD-474]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-520]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[Fe4S4-Cluster-Protein]][c] '''+''' 1 [[Octanoylated-domains]][c] '''+''' 6 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 2 [[CH33ADO]][c] '''+''' 2 [[CPD-7046]][c] '''+''' 1 [[Dihydro-Lipoyl-Proteins]][c] '''+''' 4 [[FE+2]][c] '''+''' 1 [[Iron-Sulfur-Cluster-Scaffold-Proteins]][c] '''+''' 2 [[MET]][c] '''+''' 2 [[Oxidized-ferredoxins]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_19163]]
+
* Gene: [[E_subulatus_01352]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_20753]]
+
* Gene: [[E_subulatus_14026]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[E_subulatus_15023]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_15024]]
+
* Gene: [[E_subulatus_14025]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6787]], flavonoid biosynthesis (in equisetum):
+
* [[PWY-6987]], lipoate biosynthesis and incorporation III (Bacillus):
−
** '''6''' reactions found over '''10''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5390]], rutin biosynthesis:
+
* [[PWY0-501]], lipoate biosynthesis and incorporation I:
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-3101]], flavonol biosynthesis:
+
* [[PWY0-1275]], lipoate biosynthesis and incorporation II:
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR107338
+
* METANETX-RXN : MNXR123419
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16586 16586]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02160 R02160]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07767 R07767]
−
{{#set: common-name=quercetin synthase}}
+
{{#set: common-name=lipoyl synthase}}
−
{{#set: ec-number=ec-1.14.20.6}}
+
{{#set: ec-number=ec-2.8.1.8}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=3}}
 
{{#set: nb pathway associated=3}}
 
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:38, 17 March 2021

Reaction RXN0-949

  • common-name:
    • lipoyl synthase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6987, lipoate biosynthesis and incorporation III (Bacillus):
    • 1 reactions found over 3 reactions in the full pathway
  • PWY0-501, lipoate biosynthesis and incorporation I:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY0-1275, lipoate biosynthesis and incorporation II:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR123419
  • RHEA:
  • LIGAND-RXN:





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