Difference between revisions of "RXN-8899"

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(Created page with "Category:reaction == Reaction ARGININE--TRNA-LIGASE-RXN == * common-name: ** arginine-trna ligase * ec-number: ** [http://enzyme.expasy.org/EC/6.1.1.19 ec-6.1.1.19] * dire...")
(Created page with "Category:reaction == Reaction RXN-8899 == * direction: ** left-to-right == Reaction formula == * 1 2-AMINOACRYLATE[c] '''+''' 1 PROTON[c] '''+''' 1 WATER[c] ''...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction ARGININE--TRNA-LIGASE-RXN ==
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== Reaction RXN-8899 ==
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* common-name:
 
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** arginine-trna ligase
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/6.1.1.19 ec-6.1.1.19]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[ARG]][c] '''+''' 1 [[ARG-tRNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-ARG-tRNAs]][c] '''+''' 1 [[PPI]][c]
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* 1 [[2-AMINOACRYLATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[E_subulatus_07098]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[E_subulatus_11512]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[E_subulatus_11041]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[E_subulatus_11040]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging:
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* [[PWY-7614]], methiin metabolism:
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** '''21''' reactions found over '''21''' reactions in the full pathway
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** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5707]], propanethial S-oxide biosynthesis:
 +
** '''1''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5708]], ethiin metabolism:
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6539]], (Z)-phenylmethanethial S-oxide biosynthesis:
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5706]], alliin metabolism:
 +
** '''1''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
 
== External links  ==
 
== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* METANETX-RXN : MNXR94778
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* METANETX-RXN : MNXR115706
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20302 20302]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R03646 R03646]
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** [http://www.genome.jp/dbget-bin/www_bget?R08698 R08698]
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P40329 P40329]
 
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** [http://www.uniprot.org/uniprot/P35868 P35868]
 
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** [http://www.uniprot.org/uniprot/P43832 P43832]
 
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** [http://www.uniprot.org/uniprot/O51540 O51540]
 
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** [http://www.uniprot.org/uniprot/O67068 O67068]
 
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** [http://www.uniprot.org/uniprot/O59147 O59147]
 
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** [http://www.uniprot.org/uniprot/O83803 O83803]
 
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** [http://www.uniprot.org/uniprot/Q9ZE81 Q9ZE81]
 
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** [http://www.uniprot.org/uniprot/Q9PNC0 Q9PNC0]
 
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** [http://www.uniprot.org/uniprot/Q9X0H8 Q9X0H8]
 
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** [http://www.uniprot.org/uniprot/P46906 P46906]
 
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** [http://www.uniprot.org/uniprot/Q57689 Q57689]
 
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** [http://www.uniprot.org/uniprot/O27496 O27496]
 
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** [http://www.uniprot.org/uniprot/Q9JTM7 Q9JTM7]
 
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** [http://www.uniprot.org/uniprot/Q9CE12 Q9CE12]
 
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** [http://www.uniprot.org/uniprot/P56128 P56128]
 
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** [http://www.uniprot.org/uniprot/P47618 P47618]
 
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** [http://www.uniprot.org/uniprot/Q9ZMB9 Q9ZMB9]
 
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** [http://www.uniprot.org/uniprot/Q08888 Q08888]
 
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** [http://www.uniprot.org/uniprot/P54136 P54136]
 
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** [http://www.uniprot.org/uniprot/P38714 P38714]
 
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** [http://www.uniprot.org/uniprot/Q05506 Q05506]
 
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** [http://www.uniprot.org/uniprot/P75222 P75222]
 
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** [http://www.uniprot.org/uniprot/P11875 P11875]
 
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** [http://www.uniprot.org/uniprot/O23247 O23247]
 
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** [http://www.uniprot.org/uniprot/O74781 O74781]
 
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</div>
 
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{{#set: common-name=arginine-trna ligase}}
 
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{{#set: ec-number=ec-6.1.1.19}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: nb gene associated=4}}
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{{#set: nb gene associated=0}}
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{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=5}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction tool=curation}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction comment=annotation}}
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{{#set: reconstruction source=ectocarpus_subulatus}}
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{{#set: reconstruction source=esub_adding_annot_form}}

Latest revision as of 19:38, 17 March 2021

Reaction RXN-8899

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7614, methiin metabolism:
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-5707, propanethial S-oxide biosynthesis:
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-5708, ethiin metabolism:
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6539, (Z)-phenylmethanethial S-oxide biosynthesis:
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5706, alliin metabolism:
    • 1 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR94778
  • LIGAND-RXN:




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