Difference between revisions of "R147-RXN"
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(Created page with "Category:reaction == Reaction RXN-14390 == * direction: ** left-to-right == Reaction formula == * 1 Apo-FeS-cluster-proteins[c] '''+''' 1 Chap-ATP-Co-chaperone-SP-2F...") |
(Created page with "Category:reaction == Reaction R147-RXN == * common-name: ** 1,2-dihydroxy-5-(methylthio)pent-1-en-3-one:oxygen oxidoreductase (formate-forming) ** acireductone dioxygenase...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction R147-RXN == |
+ | * common-name: | ||
+ | ** 1,2-dihydroxy-5-(methylthio)pent-1-en-3-one:oxygen oxidoreductase (formate-forming) | ||
+ | ** acireductone dioxygenase [iron(ii)-requiring] | ||
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/1.13.11.54 ec-1.13.11.54] | ||
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[CPD-85]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-479]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
+ | * Gene: [[E_subulatus_01842]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[E_subulatus_20039]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_20038]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-4361]], S-methyl-5-thio-α-D-ribose 1-phosphate degradation I: |
− | ** ''' | + | ** '''5''' reactions found over '''7''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[ | + | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a |
== External links == | == External links == | ||
− | * METANETX-RXN : | + | * METANETX-RXN : MNXR95227 |
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24505 24505] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R07364 R07364] | ||
+ | {{#set: common-name=acireductone dioxygenase [iron(ii)-requiring]|1,2-dihydroxy-5-(methylthio)pent-1-en-3-one:oxygen oxidoreductase (formate-forming)}} | ||
+ | {{#set: ec-number=ec-1.13.11.54}} | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=3}} |
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
− | {{#set: reconstruction category= | + | {{#set: reconstruction category=annotation}} |
− | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=pathwaytools}} |
− | {{#set: reconstruction comment= | + | {{#set: reconstruction comment=n.a}} |
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=ectocarpus_subulatus}} |
Latest revision as of 19:38, 17 March 2021
Contents
Reaction R147-RXN
- common-name:
- 1,2-dihydroxy-5-(methylthio)pent-1-en-3-one:oxygen oxidoreductase (formate-forming)
- acireductone dioxygenase [iron(ii)-requiring]
- ec-number:
- direction:
- left-to-right
Reaction formula
- 1 CPD-85[c] + 1 OXYGEN-MOLECULE[c] => 1 CPD-479[c] + 1 FORMATE[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: E_subulatus_01842
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: E_subulatus_20039
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_20038
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-4361, S-methyl-5-thio-α-D-ribose 1-phosphate degradation I:
- 5 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: annotation; source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
External links
Property "Common-name" (as page type) with input value "acireductone dioxygenase [iron(ii)-requiring" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.