Difference between revisions of "TransportSeed-GDP"

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(Created page with "Category:reaction == Reaction ADENYLYLSULFKIN-RXN == * common-name: ** adenylyl-sulfate kinase ** adenylylsulfate kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1...")
(Created page with "Category:reaction == Reaction TransportSeed-GDP == * direction: ** left-to-right == Reaction formula == * 1.0 GDP[e] '''=>''' 1.0 GDP[c] == Gene(s) associated with...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction ADENYLYLSULFKIN-RXN ==
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== Reaction TransportSeed-GDP ==
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* common-name:
 
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** adenylyl-sulfate kinase
 
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** adenylylsulfate kinase
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/2.7.1.25 ec-2.7.1.25]
 
 
* direction:
 
* direction:
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** reversible
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** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[APS]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[PAPS]][c] '''+''' 1 [[PROTON]][c]
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* 1.0 [[GDP]][e] '''=>''' 1.0 [[GDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[E_subulatus_22148]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_25391]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[E_subulatus_22149]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-5340]], sulfate activation for sulfonation:
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from extracellular to cytosol compartment
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* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: direction=left-to-right}}
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* METANETX-RXN : MNXR95159
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{{#set: nb gene associated=0}}
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* RHEA:
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{{#set: nb pathway associated=0}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24155 24155]
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{{#set: reconstruction category=manual}}
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* LIGAND-RXN:
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{{#set: reconstruction tool=curation}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00509 R00509]
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{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
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* UNIPROT:
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{{#set: reconstruction source=import_from_medium}}
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** [http://www.uniprot.org/uniprot/P0A6J1 P0A6J1]
 
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** [http://www.uniprot.org/uniprot/Q10600 Q10600]
 
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** [http://www.uniprot.org/uniprot/O67174 O67174]
 
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** [http://www.uniprot.org/uniprot/Q9PMP2 Q9PMP2]
 
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** [http://www.uniprot.org/uniprot/P28604 P28604]
 
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** [http://www.uniprot.org/uniprot/Q27128 Q27128]
 
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** [http://www.uniprot.org/uniprot/O43252 O43252]
 
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** [http://www.uniprot.org/uniprot/Q02196 Q02196]
 
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** [http://www.uniprot.org/uniprot/P29811 P29811]
 
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** [http://www.uniprot.org/uniprot/Q43295 Q43295]
 
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** [http://www.uniprot.org/uniprot/P72940 P72940]
 
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** [http://www.uniprot.org/uniprot/O49196 O49196]
 
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** [http://www.uniprot.org/uniprot/O49204 O49204]
 
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** [http://www.uniprot.org/uniprot/P13442 P13442]
 
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</div>
 
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{{#set: common-name=adenylyl-sulfate kinase|adenylylsulfate kinase}}
 
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{{#set: ec-number=ec-2.7.1.25}}
 
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{{#set: direction=reversible}}
 
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{{#set: nb gene associated=3}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
 

Latest revision as of 19:38, 17 March 2021

Reaction TransportSeed-GDP

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=TransportSeed-GDP&oldid=50891"