Difference between revisions of "RXN-12561"

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(Created page with "Category:reaction == Reaction COBALADENOSYLTRANS-RXN == * common-name: ** cob(i)alamin adenosyltransferase * direction: ** left-to-right == Reaction formula == * 1 ATP...")
(Created page with "Category:reaction == Reaction RXN-12561 == * common-name: ** 3-oxopantanoyl-coa thiolase * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16] * direction: **...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction COBALADENOSYLTRANS-RXN ==
+
== Reaction RXN-12561 ==
 
* common-name:
 
* common-name:
** cob(i)alamin adenosyltransferase
+
** 3-oxopantanoyl-coa thiolase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[CPD-20905]][c] '''=>''' 1 [[B12-Corrinoid-Adenosyltranferase]][c] '''+''' 1 [[P3I]][c]
+
* 1 [[CO-A]][c] '''+''' 1 [[CPD-13534]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[PROPIONYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[E_subulatus_25799]]
+
* Gene: [[E_subulatus_15293]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_15294]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_23204]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7974]], cobalamin salvage (eukaryotic):
+
* [[PWY-7948]], 4-oxopentanoate degradation:
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''9''' reactions in the full pathway
* [[PWY-6268]], adenosylcobalamin salvage from cobalamin:
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* METANETX-RXN : MNXR96476
+
* METANETX-RXN : MNXR117634
* RHEA:
+
{{#set: common-name=3-oxopantanoyl-coa thiolase}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28672 28672]
+
{{#set: ec-number=ec-2.3.1.16}}
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R01492 R01492]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P0A9H5 P0A9H5]
 
** [http://www.uniprot.org/uniprot/O30785 O30785]
 
{{#set: common-name=cob(i)alamin adenosyltransferase}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=3}}
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:39, 17 March 2021

Reaction RXN-12561

  • common-name:
    • 3-oxopantanoyl-coa thiolase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7948, 4-oxopentanoate degradation:
    • 2 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR117634