Difference between revisions of "PRPPSYN-RXN"

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(Created page with "Category:reaction == Reaction RXN-10615 == * common-name: ** sulfotransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.8.2.1 ec-2.8.2.1] * direction: ** left-to-righ...")
(Created page with "Category:reaction == Reaction PRPPSYN-RXN == * common-name: ** ribose phosphate diphosphokinase ** ribose-phosphate diphosphokinase * ec-number: ** [http://enzyme.expasy.o...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-10615 ==
+
== Reaction PRPPSYN-RXN ==
 
* common-name:
 
* common-name:
−
** sulfotransferase
+
** ribose phosphate diphosphokinase
 +
** ribose-phosphate diphosphokinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.8.2.1 ec-2.8.2.1]
+
** [http://enzyme.expasy.org/EC/2.7.6.1 ec-2.7.6.1]
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[LIOTHYRONINE]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[CPD-11408]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[RIBOSE-5P]][c] '''<=>''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PRPP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* Gene: [[E_subulatus_08626]]
+
* Gene: [[E_subulatus_01560]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_03977]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_00494]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_01473]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_07613]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_01471]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_01472]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_00654]]
+
* Gene: [[E_subulatus_15931]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_17845]]
+
* Gene: [[E_subulatus_16209]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_00904]]
+
* Gene: [[E_subulatus_01561]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_00905]]
+
* Gene: [[E_subulatus_01539]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_17846]]
+
* Gene: [[E_subulatus_20326]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_06138]]
+
* Gene: [[E_subulatus_16210]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_06137]]
+
* Gene: [[E_subulatus_01470]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_08627]]
+
* Gene: [[E_subulatus_15930]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
</div>
 
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6261]], thyroid hormone metabolism II (via conjugation and/or degradation):
+
* [[PWY0-662]], PRPP biosynthesis:
−
** '''10''' reactions found over '''15''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR116415
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: common-name=sulfotransferase}}
+
* METANETX-RXN : MNXR141212
−
{{#set: ec-number=ec-2.8.2.1}}
+
* RHEA:
−
{{#set: direction=left-to-right}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15612 15612]
−
{{#set: nb gene associated=10}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01049 R01049]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q63468 Q63468]
 +
** [http://www.uniprot.org/uniprot/Q9CEI4 Q9CEI4]
 +
** [http://www.uniprot.org/uniprot/O67556 O67556]
 +
** [http://www.uniprot.org/uniprot/P44328 P44328]
 +
** [http://www.uniprot.org/uniprot/Q9PP15 Q9PP15]
 +
** [http://www.uniprot.org/uniprot/P56184 P56184]
 +
** [http://www.uniprot.org/uniprot/P65235 P65235]
 +
** [http://www.uniprot.org/uniprot/Q9CHB8 Q9CHB8]
 +
** [http://www.uniprot.org/uniprot/P42816 P42816]
 +
** [http://www.uniprot.org/uniprot/Q59988 Q59988]
 +
** [http://www.uniprot.org/uniprot/P14193 P14193]
 +
** [http://www.uniprot.org/uniprot/P0A1V6 P0A1V6]
 +
** [http://www.uniprot.org/uniprot/P0A717 P0A717]
 +
** [http://www.uniprot.org/uniprot/P60891 P60891]
 +
** [http://www.uniprot.org/uniprot/P11908 P11908]
 +
** [http://www.uniprot.org/uniprot/P21108 P21108]
 +
** [http://www.uniprot.org/uniprot/P60892 P60892]
 +
** [http://www.uniprot.org/uniprot/P09330 P09330]
 +
** [http://www.uniprot.org/uniprot/P32895 P32895]
 +
** [http://www.uniprot.org/uniprot/Q59489 Q59489]
 +
** [http://www.uniprot.org/uniprot/P38620 P38620]
 +
** [http://www.uniprot.org/uniprot/P38063 P38063]
 +
** [http://www.uniprot.org/uniprot/P38689 P38689]
 +
** [http://www.uniprot.org/uniprot/Q42581 Q42581]
 +
** [http://www.uniprot.org/uniprot/P41831 P41831]
 +
** [http://www.uniprot.org/uniprot/P46585 P46585]
 +
** [http://www.uniprot.org/uniprot/Q42583 Q42583]
 +
** [http://www.uniprot.org/uniprot/Q14558 Q14558]
 +
** [http://www.uniprot.org/uniprot/Q55848 Q55848]
 +
** [http://www.uniprot.org/uniprot/Q49042 Q49042]
 +
** [http://www.uniprot.org/uniprot/O64888 O64888]
 +
** [http://www.uniprot.org/uniprot/Q680A5 Q680A5]
 +
** [http://www.uniprot.org/uniprot/Q93Z66 Q93Z66]
 +
</div>
 +
{{#set: common-name=ribose-phosphate diphosphokinase|ribose phosphate diphosphokinase}}
 +
{{#set: ec-number=ec-2.7.6.1}}
 +
{{#set: direction=reversible}}
 +
{{#set: nb gene associated=14}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Latest revision as of 19:39, 17 March 2021

Reaction PRPPSYN-RXN

  • common-name:
    • ribose phosphate diphosphokinase
    • ribose-phosphate diphosphokinase
  • ec-number:
  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-662, PRPP biosynthesis:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=PRPPSYN-RXN&oldid=51294"