Difference between revisions of "RXN-5109"

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(Created page with "Category:reaction == Reaction RXN-11519 == * direction: ** left-to-right == Reaction formula == * 1 3-7-DIMETHYLXANTHINE[c] '''+''' 1 OXYGEN-MOLECULE[c] '''+''' 1...")
(Created page with "Category:reaction == Reaction RXN-5109 == * common-name: ** (e)-beta-ocimene synthase * ec-number: ** [http://enzyme.expasy.org/EC/4.2.3.106 ec-4.2.3.106] * direction: **...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-11519 ==
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== Reaction RXN-5109 ==
 +
* common-name:
 +
** (e)-beta-ocimene synthase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/4.2.3.106 ec-4.2.3.106]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[3-7-DIMETHYLXANTHINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-12482]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
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* 1 [[GERANYL-PP]][c] '''=>''' 1 [[CPD-4889]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[E_subulatus_07435]]
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* Gene: [[E_subulatus_01092]]
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** Category: [[orthology]]
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** Category: [[annotation]]
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*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[E_subulatus_07434]]
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* Gene: [[E_subulatus_01093]]
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** Category: [[orthology]]
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** Category: [[annotation]]
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_00870]]
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* Gene: [[E_subulatus_01091]]
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** Category: [[orthology]]
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** Category: [[annotation]]
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_24029]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-6632]], caffeine degradation IV (bacteria, via demethylation and oxidation):
+
* [[PWY-3041]], monoterpene biosynthesis:
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** '''4''' reactions found over '''3''' reactions in the full pathway
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** '''2''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
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* METANETX-RXN : MNXR111561
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* RHEA:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32692 32692]
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** [http://www.genome.jp/dbget-bin/www_bget?R07978 R07978]
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{{#set: common-name=(e)-beta-ocimene synthase}}
 +
{{#set: ec-number=ec-4.2.3.106}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=4}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:39, 17 March 2021

Reaction RXN-5109

  • common-name:
    • (e)-beta-ocimene synthase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-3041, monoterpene biosynthesis:
    • 2 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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