Difference between revisions of "VALINE--TRNA-LIGASE-RXN"

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(Created page with "Category:reaction == Reaction H2PTEROATESYNTH-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.15 ec-2.5.1.15] * direction: ** left-to-right == Reaction formula =...")
(Created page with "Category:reaction == Reaction VALINE--TRNA-LIGASE-RXN == * common-name: ** valine-trna ligase ** valine—trna ligase * ec-number: ** [http://enzyme.expasy.org/EC/6.1....")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction H2PTEROATESYNTH-RXN ==
+
== Reaction VALINE--TRNA-LIGASE-RXN ==
 +
* common-name:
 +
** valine-trna ligase
 +
** valine—trna ligase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.15 ec-2.5.1.15]
+
** [http://enzyme.expasy.org/EC/6.1.1.9 ec-6.1.1.9]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DIHYDROPTERIN-CH2OH-PP]][c] '''+''' 1 [[P-AMINO-BENZOATE]][c] '''=>''' 1 [[7-8-DIHYDROPTEROATE]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[VAL]][c] '''+''' 1 [[VAL-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-VAL-tRNAs]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_05198]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** Category: [[orthology]]
+
* Gene: [[E_subulatus_16722]]
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_16720]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_16724]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_16721]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_16723]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_22977]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_22978]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_16725]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_10900]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_22979]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6614]], tetrahydrofolate biosynthesis:
+
* [[TRNA-CHARGING-PWY]], tRNA charging:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* METANETX-RXN : MNXR140085
+
* METANETX-RXN : MNXR124096
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19950 19950]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10705 10705]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03067 R03067]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03665 R03665]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P0AC11 P0AC11]
+
** [http://www.uniprot.org/uniprot/P28350 P28350]
−
** [http://www.uniprot.org/uniprot/P0AC13 P0AC13]
+
** [http://www.uniprot.org/uniprot/P36420 P36420]
−
** [http://www.uniprot.org/uniprot/Q05851 Q05851]
+
** [http://www.uniprot.org/uniprot/P56000 P56000]
−
** [http://www.uniprot.org/uniprot/Q25704 Q25704]
+
** [http://www.uniprot.org/uniprot/O51680 O51680]
−
** [http://www.uniprot.org/uniprot/P0A578 P0A578]
+
** [http://www.uniprot.org/uniprot/O67411 O67411]
−
** [http://www.uniprot.org/uniprot/O84619 O84619]
+
** [http://www.uniprot.org/uniprot/O83998 O83998]
−
** [http://www.uniprot.org/uniprot/P0C003 P0C003]
+
** [http://www.uniprot.org/uniprot/Q9ZCN6 Q9ZCN6]
−
** [http://www.uniprot.org/uniprot/Q9ZJZ4 Q9ZJZ4]
+
** [http://www.uniprot.org/uniprot/Q9Z987 Q9Z987]
−
** [http://www.uniprot.org/uniprot/Q9CGE2 Q9CGE2]
+
** [http://www.uniprot.org/uniprot/Q9X2D7 Q9X2D7]
−
** [http://www.uniprot.org/uniprot/Q9JT70 Q9JT70]
+
** [http://www.uniprot.org/uniprot/Q9ZK61 Q9ZK61]
−
** [http://www.uniprot.org/uniprot/P43776 P43776]
+
** [http://www.uniprot.org/uniprot/Q9CDP6 Q9CDP6]
−
** [http://www.uniprot.org/uniprot/P64139 P64139]
+
** [http://www.uniprot.org/uniprot/Q58413 Q58413]
−
** [http://www.uniprot.org/uniprot/Q9WXP7 Q9WXP7]
+
** [http://www.uniprot.org/uniprot/P43834 P43834]
−
** [http://www.uniprot.org/uniprot/O67448 O67448]
+
** [http://www.uniprot.org/uniprot/Q9PPE4 Q9PPE4]
−
** [http://www.uniprot.org/uniprot/P28822 P28822]
+
** [http://www.uniprot.org/uniprot/O84304 O84304]
−
** [http://www.uniprot.org/uniprot/Q9Z7E8 Q9Z7E8]
+
** [http://www.uniprot.org/uniprot/P47576 P47576]
−
** [http://www.uniprot.org/uniprot/P82602 P82602]
+
** [http://www.uniprot.org/uniprot/Q94678 Q94678]
−
** [http://www.uniprot.org/uniprot/O25830 O25830]
+
** [http://www.uniprot.org/uniprot/Q04462 Q04462]
−
** [http://www.uniprot.org/uniprot/Q9RXY6 Q9RXY6]
+
** [http://www.uniprot.org/uniprot/P26640 P26640]
−
** [http://www.uniprot.org/uniprot/Q9PHT1 Q9PHT1]
+
** [http://www.uniprot.org/uniprot/Q05873 Q05873]
−
** [http://www.uniprot.org/uniprot/Q52352 Q52352]
+
** [http://www.uniprot.org/uniprot/Q26177 Q26177]
−
** [http://www.uniprot.org/uniprot/Q49184 Q49184]
+
** [http://www.uniprot.org/uniprot/P75304 P75304]
−
** [http://www.uniprot.org/uniprot/Q51161 Q51161]
+
** [http://www.uniprot.org/uniprot/Q49021 Q49021]
−
** [http://www.uniprot.org/uniprot/P73248 P73248]
+
** [http://www.uniprot.org/uniprot/P11931 P11931]
−
** [http://www.uniprot.org/uniprot/P0C002 P0C002]
+
** [http://www.uniprot.org/uniprot/P07806 P07806]
−
** [http://www.uniprot.org/uniprot/O04862 O04862]
+
** [http://www.uniprot.org/uniprot/P07118 P07118]
−
** [http://www.uniprot.org/uniprot/Q9SZV3 Q9SZV3]
+
** [http://www.uniprot.org/uniprot/O77443 O77443]
−
** [http://www.uniprot.org/uniprot/Q9X8H8 Q9X8H8]
 
−
** [http://www.uniprot.org/uniprot/O75013 O75013]
 
−
** [http://www.uniprot.org/uniprot/P0C0X2 P0C0X2]
 
 
</div>
 
</div>
−
{{#set: ec-number=ec-2.5.1.15}}
+
{{#set: common-name=valine-trna ligase|valine&mdash;trna ligase}}
 +
{{#set: ec-number=ec-6.1.1.9}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=10}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:39, 17 March 2021

Reaction VALINE--TRNA-LIGASE-RXN

  • common-name:
    • valine-trna ligase
    • valine—trna ligase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TRNA-CHARGING-PWY, tRNA charging:
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links





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