Difference between revisions of "HOMOGENTISATE-12-DIOXYGENASE-RXN"

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(Created page with "Category:reaction == Reaction HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN == * common-name: ** hydroxymethylglutaryl-coa lyase * ec-number: ** [http://enzyme.expasy.org/EC/4.1.3.4...")
(Created page with "Category:reaction == Reaction HOMOGENTISATE-12-DIOXYGENASE-RXN == * common-name: ** homogentisate oxygenase * ec-number: ** [http://enzyme.expasy.org/EC/1.13.11.5 ec-1.13....")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN ==
+
== Reaction HOMOGENTISATE-12-DIOXYGENASE-RXN ==
 
* common-name:
 
* common-name:
−
** hydroxymethylglutaryl-coa lyase
+
** homogentisate oxygenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.3.4 ec-4.1.3.4]
+
** [http://enzyme.expasy.org/EC/1.13.11.5 ec-1.13.11.5]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-HYDROXY-3-METHYL-GLUTARYL-COA]][c] '''=>''' 1 [[3-KETOBUTYRATE]][c] '''+''' 1 [[ACETYL-COA]][c]
+
* 1 [[HOMOGENTISATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[4-MALEYL-ACETOACETATE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_22330]]
+
* Gene: [[E_subulatus_02611]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[LEU-DEG2-PWY]], L-leucine degradation I:
+
* [[TYRFUMCAT-PWY]], L-tyrosine degradation I:
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY66-367]], ketogenesis:
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5074]], mevalonate degradation:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR106950
+
* METANETX-RXN : MNXR100628
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24405 24405]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15450 15450]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01360 R01360]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02519 R02519]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P35914 P35914]
+
** [http://www.uniprot.org/uniprot/Q9Y041 Q9Y041]
−
** [http://www.uniprot.org/uniprot/P35915 P35915]
+
{{#set: common-name=homogentisate oxygenase}}
−
** [http://www.uniprot.org/uniprot/Q8L7K2 Q8L7K2]
+
{{#set: ec-number=ec-1.13.11.5}}
−
{{#set: common-name=hydroxymethylglutaryl-coa lyase}}
 
−
{{#set: ec-number=ec-4.1.3.4}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:40, 17 March 2021

Reaction HOMOGENTISATE-12-DIOXYGENASE-RXN

  • common-name:
    • homogentisate oxygenase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TYRFUMCAT-PWY, L-tyrosine degradation I:
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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