Difference between revisions of "POLYNUCLEOTIDE-5-PHOSPHATASE-RXN"

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(Created page with "Category:reaction == Reaction RXN66-221 == * common-name: ** dopa decarboxylase * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.28 ec-4.1.1.28] * direction: ** left-to-...")
(Created page with "Category:reaction == Reaction POLYNUCLEOTIDE-5-PHOSPHATASE-RXN == * common-name: ** polynucleotide 5'-phosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.33 ec-...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN66-221 ==
+
== Reaction POLYNUCLEOTIDE-5-PHOSPHATASE-RXN ==
 
* common-name:
 
* common-name:
−
** dopa decarboxylase
+
** polynucleotide 5'-phosphatase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.28 ec-4.1.1.28]
+
** [http://enzyme.expasy.org/EC/3.1.3.33 ec-3.1.3.33]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-DIHYDROXY-PHENYLALANINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DOPAMINE]][c]
+
* 1 [[5-ppp-Pur-mRNA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-8630]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_01359]]
+
* Gene: [[E_subulatus_18352]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_18354]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_18351]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_18353]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5403]], betaxanthin biosynthesis (via dopamine):
+
* [[PWY-7375]], mRNA capping I:
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5426]], betaxanthin biosynthesis:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY66-301]], catecholamine biosynthesis:
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-3581]], (S)-reticuline biosynthesis I:
 
−
** '''3''' reactions found over '''11''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR107302
+
* METANETX-RXN : MNXR116142
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12273 12273]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02080 R02080]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02249 R02249]
−
{{#set: common-name=dopa decarboxylase}}
+
{{#set: common-name=polynucleotide 5'-phosphatase}}
−
{{#set: ec-number=ec-4.1.1.28}}
+
{{#set: ec-number=ec-3.1.3.33}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:40, 17 March 2021

Reaction POLYNUCLEOTIDE-5-PHOSPHATASE-RXN

  • common-name:
    • polynucleotide 5'-phosphatase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7375, mRNA capping I:
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR116142
  • LIGAND-RXN:





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