Difference between revisions of "ORNCARBAMTRANSFER-RXN"

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(Created page with "Category:reaction == Reaction GTP-CYCLOHYDRO-II-RXN == * common-name: ** gtp cyclohydrolase ii * ec-number: ** [http://enzyme.expasy.org/EC/3.5.4.25 ec-3.5.4.25] * directi...")
(Created page with "Category:reaction == Reaction ORNCARBAMTRANSFER-RXN == * direction: ** reversible * ec_number: ** ec-2.1.3.3 == Reaction formula == * 1 CARBAMOYL-P[c] '''+''' 1 L-OR...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GTP-CYCLOHYDRO-II-RXN ==
+
== Reaction ORNCARBAMTRANSFER-RXN ==
−
* common-name:
 
−
** gtp cyclohydrolase ii
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/3.5.4.25 ec-3.5.4.25]
 
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* ec_number:
 +
** ec-2.1.3.3
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GTP]][c] '''+''' 3 [[WATER]][c] '''=>''' 1 [[DIAMINO-OH-PHOSPHORIBOSYLAMINO-PYR]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c]
+
* 1 [[CARBAMOYL-P]][c] '''+''' 1 [[L-ORNITHINE]][c] '''<=>''' 1 [[L-CITRULLINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_18127]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_04571]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[E_subulatus_04573]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_04572]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_18126]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7991]], toxoflavin biosynthesis:
+
* [[CITRULBIO-PWY]], L-citrulline biosynthesis:
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants):
+
* [[PWY-4981]], L-proline biosynthesis II (from arginine):
 +
** '''4''' reactions found over '''2''' reactions in the full pathway
 +
* [[CITRULLINE-DEG-PWY]], L-citrulline degradation:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7400]], L-arginine biosynthesis IV (archaea):
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
** '''7''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6168]], flavin biosynthesis III (fungi):
+
* [[PWY-4984]], urea cycle:
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7539]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia):
+
* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine):
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''5''' reactions found over '''4''' reactions in the full pathway
 +
* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle):
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
−
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* METANETX-RXN : MNXR100455
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23705 23705]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19516 19516]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00425 R00425]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01398 R01398]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P0A7I7 P0A7I7]
+
** [http://www.uniprot.org/uniprot/Q58291 Q58291]
−
** [http://www.uniprot.org/uniprot/Q9PNU4 Q9PNU4]
+
** [http://www.uniprot.org/uniprot/Q9CHD1 Q9CHD1]
−
** [http://www.uniprot.org/uniprot/O08315 O08315]
+
** [http://www.uniprot.org/uniprot/Q7M182 Q7M182]
−
** [http://www.uniprot.org/uniprot/O66679 O66679]
+
** [http://www.uniprot.org/uniprot/Q9JTI4 Q9JTI4]
−
** [http://www.uniprot.org/uniprot/Q9PHU4 Q9PHU4]
+
** [http://www.uniprot.org/uniprot/P11727 P11727]
−
** [http://www.uniprot.org/uniprot/O25484 O25484]
+
** [http://www.uniprot.org/uniprot/Q9CEY4 Q9CEY4]
−
** [http://www.uniprot.org/uniprot/P0A5V0 P0A5V0]
+
** [http://www.uniprot.org/uniprot/Q9CE14 Q9CE14]
−
** [http://www.uniprot.org/uniprot/P0A7I8 P0A7I8]
+
** [http://www.uniprot.org/uniprot/Q9PNU6 Q9PNU6]
−
** [http://www.uniprot.org/uniprot/P43525 P43525]
+
** [http://www.uniprot.org/uniprot/P44770 P44770]
−
** [http://www.uniprot.org/uniprot/P17620 P17620]
+
** [http://www.uniprot.org/uniprot/Q9YHY9 Q9YHY9]
−
** [http://www.uniprot.org/uniprot/P38066 P38066]
+
** [http://www.uniprot.org/uniprot/P11066 P11066]
−
** [http://www.uniprot.org/uniprot/P50139 P50139]
+
** [http://www.uniprot.org/uniprot/P11803 P11803]
−
** [http://www.uniprot.org/uniprot/P74104 P74104]
+
** [http://www.uniprot.org/uniprot/P18186 P18186]
−
** [http://www.uniprot.org/uniprot/O24019 O24019]
+
** [http://www.uniprot.org/uniprot/P05150 P05150]
−
** [http://www.uniprot.org/uniprot/P51695 P51695]
+
** [http://www.uniprot.org/uniprot/P14995 P14995]
−
** [http://www.uniprot.org/uniprot/P50855 P50855]
+
** [http://www.uniprot.org/uniprot/P06960 P06960]
 +
** [http://www.uniprot.org/uniprot/P04391 P04391]
 +
** [http://www.uniprot.org/uniprot/P00480 P00480]
 +
** [http://www.uniprot.org/uniprot/P11725 P11725]
 +
** [http://www.uniprot.org/uniprot/P21302 P21302]
 +
** [http://www.uniprot.org/uniprot/P11724 P11724]
 +
** [http://www.uniprot.org/uniprot/P08308 P08308]
 +
** [http://www.uniprot.org/uniprot/P68747 P68747]
 +
** [http://www.uniprot.org/uniprot/P00481 P00481]
 +
** [http://www.uniprot.org/uniprot/P31317 P31317]
 +
** [http://www.uniprot.org/uniprot/Q01322 Q01322]
 +
** [http://www.uniprot.org/uniprot/Q01323 Q01323]
 +
** [http://www.uniprot.org/uniprot/Q01324 Q01324]
 +
** [http://www.uniprot.org/uniprot/Q01326 Q01326]
 +
** [http://www.uniprot.org/uniprot/Q01325 Q01325]
 +
** [http://www.uniprot.org/uniprot/Q9JYI3 Q9JYI3]
 +
** [http://www.uniprot.org/uniprot/Q01327 Q01327]
 +
** [http://www.uniprot.org/uniprot/P0A5M9 P0A5M9]
 +
** [http://www.uniprot.org/uniprot/Q02047 Q02047]
 +
** [http://www.uniprot.org/uniprot/Q9TRC9 Q9TRC9]
 +
** [http://www.uniprot.org/uniprot/Q48296 Q48296]
 +
** [http://www.uniprot.org/uniprot/P75473 P75473]
 +
** [http://www.uniprot.org/uniprot/Q49080 Q49080]
 +
** [http://www.uniprot.org/uniprot/Q43814 Q43814]
 +
** [http://www.uniprot.org/uniprot/O53089 O53089]
 +
** [http://www.uniprot.org/uniprot/O50039 O50039]
 
</div>
 
</div>
−
{{#set: common-name=gtp cyclohydrolase ii}}
+
{{#set: direction=reversible}}
−
{{#set: ec-number=ec-3.5.4.25}}
+
{{#set: ec_number=ec-2.1.3.3}}
−
{{#set: direction=left-to-right}}
+
{{#set: nb gene associated=0}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb pathway associated=7}}
−
{{#set: nb pathway associated=4}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction comment=annotation}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=esub_adding_annot_form}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
 

Latest revision as of 19:40, 17 March 2021

Reaction ORNCARBAMTRANSFER-RXN

  • direction:
    • reversible
  • ec_number:
    • ec-2.1.3.3

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • CITRULBIO-PWY, L-citrulline biosynthesis:
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-4981, L-proline biosynthesis II (from arginine):
    • 4 reactions found over 2 reactions in the full pathway
  • CITRULLINE-DEG-PWY, L-citrulline degradation:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7400, L-arginine biosynthesis IV (archaea):
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-4984, urea cycle:
    • 5 reactions found over 5 reactions in the full pathway
  • ARGSYN-PWY, L-arginine biosynthesis I (via L-ornithine):
    • 5 reactions found over 4 reactions in the full pathway
  • ARGSYNBSUB-PWY, L-arginine biosynthesis II (acetyl cycle):
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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