Difference between revisions of "RXN-905"

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(Created page with "Category:reaction == Reaction HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN == * common-name: ** hydroxymethyl glutaryl-coa synthase ** hydroxymethylglutaryl-coa synthase * ec-nu...")
(Created page with "Category:reaction == Reaction RXN-905 == * direction: ** left-to-right * ec_number: ** ec-1.1.1.35 == Reaction formula == * 1 CARBOXYMETHYL-HYDROXYPHENYLPROPCOA[c] '''...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN ==
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== Reaction RXN-905 ==
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* common-name:
 
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** hydroxymethyl glutaryl-coa synthase
 
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** hydroxymethylglutaryl-coa synthase
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/2.3.3.10 ec-2.3.3.10]
 
 
* direction:
 
* direction:
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** reversible
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** left-to-right
 +
* ec_number:
 +
** ec-1.1.1.35
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[ACETOACETYL-COA]][c] '''+''' 1 [[ACETYL-COA]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[3-HYDROXY-3-METHYL-GLUTARYL-COA]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c]
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* 1 [[CARBOXYMETHYL-HYDROXYPHENYLPROPCOA]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[BENZOYLSUCCINYL-COA]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[E_subulatus_02861]]
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* Gene: [[EsuBft1484_6a]]
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** Category: [[annotation]]
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** Category: [[manual]]
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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*** Source: [[esub_adding_annot_form]], Tool: [[unknown-tool]], Assignment: n.a, Comment: annotation
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* Gene: [[E_subulatus_06769]]
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* Gene: [[EsuBft1203_2a]]
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** Category: [[annotation]]
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** Category: [[manual]]
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[esub_adding_annot_form]], Tool: [[unknown-tool]], Assignment: n.a, Comment: annotation
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[E_subulatus_05504]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_05505]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_02860]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-7391]], isoprene biosynthesis II (engineered):
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* [[PWY-81]], toluene degradation to benzoyl-CoA (anaerobic):
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** '''7''' reactions found over '''8''' reactions in the full pathway
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6174]], mevalonate pathway II (haloarchaea):
 
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** '''5''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-922]], mevalonate pathway I (eukaryotes and bacteria):
 
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** '''7''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7571]], ferrichrome A biosynthesis:
 
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** '''2''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY66-367]], ketogenesis:
 
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** '''4''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-7524]], mevalonate pathway III (Thermoplasma):
 
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** '''4''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
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* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* METANETX-RXN : MNXR122604
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* METANETX-RXN : MNXR107257
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{{#set: direction=left-to-right}}
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* RHEA:
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{{#set: ec_number=ec-1.1.1.35}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10191 10191]
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{{#set: nb gene associated=2}}
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* LIGAND-RXN:
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{{#set: nb pathway associated=1}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01978 R01978]
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{{#set: reconstruction category=manual}}
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* UNIPROT:
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{{#set: reconstruction tool=curation}}
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** [http://www.uniprot.org/uniprot/P13704 P13704]
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{{#set: reconstruction comment=annotation}}
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** [http://www.uniprot.org/uniprot/P22791 P22791]
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{{#set: reconstruction source=esub_adding_annot_form}}
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** [http://www.uniprot.org/uniprot/P54870 P54870]
 
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** [http://www.uniprot.org/uniprot/P54869 P54869]
 
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** [http://www.uniprot.org/uniprot/O51626 O51626]
 
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** [http://www.uniprot.org/uniprot/Q9CFA9 Q9CFA9]
 
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** [http://www.uniprot.org/uniprot/P17425 P17425]
 
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** [http://www.uniprot.org/uniprot/Q7LZE7 Q7LZE7]
 
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** [http://www.uniprot.org/uniprot/Q01581 Q01581]
 
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** [http://www.uniprot.org/uniprot/P54961 P54961]
 
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** [http://www.uniprot.org/uniprot/P54839 P54839]
 
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** [http://www.uniprot.org/uniprot/P54874 P54874]
 
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** [http://www.uniprot.org/uniprot/P54868 P54868]
 
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** [http://www.uniprot.org/uniprot/P54873 P54873]
 
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** [http://www.uniprot.org/uniprot/P93773 P93773]
 
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</div>
 
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{{#set: common-name=hydroxymethylglutaryl-coa synthase|hydroxymethyl glutaryl-coa synthase}}
 
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{{#set: ec-number=ec-2.3.3.10}}
 
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{{#set: direction=reversible}}
 
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{{#set: nb gene associated=5}}
 
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{{#set: nb pathway associated=6}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
 

Latest revision as of 19:40, 17 March 2021

Reaction RXN-905

  • direction:
    • left-to-right
  • ec_number:
    • ec-1.1.1.35

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-81, toluene degradation to benzoyl-CoA (anaerobic):
    • 2 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122604





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