Difference between revisions of "RXN-9556"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction BUTYRYL-COA-DEHYDROGENASE-RXN == * common-name: ** butanoyl-coa dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.8.1 ec-1.3.8.1...")
(Created page with "Category:reaction == Reaction RXN-9556 == * common-name: ** 3-oxo-cis-vaccenoyl-[acyl-carrier protein] reductase ** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph) * ec...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction BUTYRYL-COA-DEHYDROGENASE-RXN ==
+
== Reaction RXN-9556 ==
 
* common-name:
 
* common-name:
−
** butanoyl-coa dehydrogenase
+
** 3-oxo-cis-vaccenoyl-[acyl-carrier protein] reductase
 +
** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.8.1 ec-1.3.8.1]
+
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[BUTYRYL-COA]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[CROTONYL-COA]][c] '''+''' 1 [[ETF-Reduced]][c]
+
* 1 [[3-oxo-cis-vaccenoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[R-3-hydroxy-cis-vaccenoyl-ACPs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_25108]]
+
* Gene: [[E_subulatus_15265]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_21544]]
+
* Gene: [[E_subulatus_15266]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_25109]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_25110]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate):
+
* [[PWY-5973]], cis-vaccenate biosynthesis:
−
** '''5''' reactions found over '''10''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[CENTFERM-PWY]], pyruvate fermentation to butanoate:
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[P163-PWY]], L-lysine fermentation to acetate and butanoate:
 
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5022]], 4-aminobutanoate degradation V:
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5676]], acetyl-CoA fermentation to butanoate II:
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5677]], succinate fermentation to butanoate:
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[P3-PWY]], gallate degradation III (anaerobic):
 
−
** '''3''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-6583]], pyruvate fermentation to butanol I:
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR115742
+
* METANETX-RXN : MNXR122861
−
* RHEA:
+
{{#set: common-name=3-oxo-cis-vaccenoyl-[acyl-carrier protein] reductase|3-oxoacyl-[acyl-carrier-protein] reductase (nadph)}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24006 24006]
+
{{#set: ec-number=ec-1.1.1.100}}
−
* LIGAND-RXN:
+
{{#set: direction=left-to-right}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01178 R01178]
+
{{#set: nb gene associated=2}}
−
{{#set: common-name=butanoyl-coa dehydrogenase}}
+
{{#set: nb pathway associated=1}}
−
{{#set: ec-number=ec-1.3.8.1}}
 
−
{{#set: direction=reversible}}
 
−
{{#set: nb gene associated=4}}
 
−
{{#set: nb pathway associated=8}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:41, 17 March 2021

Reaction RXN-9556

  • common-name:
    • 3-oxo-cis-vaccenoyl-[acyl-carrier protein] reductase
    • 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5973, cis-vaccenate biosynthesis:
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122861
  • Property "Common-name" (as page type) with input value "3-oxo-cis-vaccenoyl-[acyl-carrier protein] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] reductase (nadph)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.





Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=RXN-9556&oldid=52119"