Difference between revisions of "1.1.1.8-RXN"

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(Created page with "Category:reaction == Reaction 2.5.1.19-RXN == * direction: ** reversible * ec_number: ** ec-2.5.1.19 == Reaction formula == * 1 PHOSPHO-ENOL-PYRUVATE[c] '''+''' 1 SH...")
(Created page with "Category:reaction == Reaction 1.1.1.8-RXN == * common-name: ** glycerol 3-phosphate dehydrogenase ** glycerol-3-phosphate dehydrogenase [nad+] * ec-number: ** [http://enzy...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.5.1.19-RXN ==
+
== Reaction 1.1.1.8-RXN ==
 +
* common-name:
 +
** glycerol 3-phosphate dehydrogenase
 +
** glycerol-3-phosphate dehydrogenase [nad+]
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.8 ec-1.1.1.8]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* ec_number:
 
−
** ec-2.5.1.19
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[SHIKIMATE-5P]][c] '''<=>''' 1 [[3-ENOLPYRUVYL-SHIKIMATE-5P]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[NAD]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[E_subulatus_06480]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_11786]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_04110]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_04109]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_07295]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_06479]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_04111]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_11787]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_06481]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_19994]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_07294]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_06478]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate:
+
* [[PWY-7411]], phosphatidate biosynthesis (yeast):
−
** '''6''' reactions found over '''5''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6118]], glycerol-3-phosphate shuttle:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered):
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[esub_adding_gp_form]]; tool: [[curation]]; comment: gap-filling
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR99876
−
* METANETX-RXN : MNXR103226
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21259 21259]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03460 R03460]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00842 R00842]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P22299 P22299]
+
** [http://www.uniprot.org/uniprot/P13707 P13707]
−
** [http://www.uniprot.org/uniprot/P07547 P07547]
+
** [http://www.uniprot.org/uniprot/P08507 P08507]
−
** [http://www.uniprot.org/uniprot/P08566 P08566]
+
** [http://www.uniprot.org/uniprot/O25614 O25614]
−
** [http://www.uniprot.org/uniprot/P22487 P22487]
+
** [http://www.uniprot.org/uniprot/Q9JWH0 Q9JWH0]
−
** [http://www.uniprot.org/uniprot/P52312 P52312]
+
** [http://www.uniprot.org/uniprot/P43798 P43798]
−
** [http://www.uniprot.org/uniprot/Q9JTT3 Q9JTT3]
+
** [http://www.uniprot.org/uniprot/O29390 O29390]
−
** [http://www.uniprot.org/uniprot/Q03421 Q03421]
+
** [http://www.uniprot.org/uniprot/P46919 P46919]
−
** [http://www.uniprot.org/uniprot/P19786 P19786]
+
** [http://www.uniprot.org/uniprot/P07735 P07735]
−
** [http://www.uniprot.org/uniprot/P17688 P17688]
+
** [http://www.uniprot.org/uniprot/P13706 P13706]
−
** [http://www.uniprot.org/uniprot/P24497 P24497]
+
** [http://www.uniprot.org/uniprot/Q00055 Q00055]
−
** [http://www.uniprot.org/uniprot/P23981 P23981]
+
** [http://www.uniprot.org/uniprot/P34517 P34517]
−
** [http://www.uniprot.org/uniprot/P23281 P23281]
+
** [http://www.uniprot.org/uniprot/P0A6S7 P0A6S7]
−
** [http://www.uniprot.org/uniprot/Q04570 Q04570]
+
** [http://www.uniprot.org/uniprot/P21695 P21695]
−
** [http://www.uniprot.org/uniprot/P43905 P43905]
+
** [http://www.uniprot.org/uniprot/P41911 P41911]
−
** [http://www.uniprot.org/uniprot/Q59975 Q59975]
+
** [http://www.uniprot.org/uniprot/P90593 P90593]
−
** [http://www.uniprot.org/uniprot/P12421 P12421]
+
{{#set: common-name=glycerol 3-phosphate dehydrogenase|glycerol-3-phosphate dehydrogenase [nad+]}}
−
** [http://www.uniprot.org/uniprot/P07637 P07637]
+
{{#set: ec-number=ec-1.1.1.8}}
−
** [http://www.uniprot.org/uniprot/P19688 P19688]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P0A6D3 P0A6D3]
+
{{#set: nb gene associated=12}}
−
** [http://www.uniprot.org/uniprot/P11043 P11043]
+
{{#set: nb pathway associated=3}}
−
</div>
+
{{#set: reconstruction category=annotation}}
−
{{#set: direction=reversible}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: ec_number=ec-2.5.1.19}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: nb gene associated=0}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=manual}}
 
−
{{#set: reconstruction tool=curation}}
 
−
{{#set: reconstruction comment=gap-filling}}
 
−
{{#set: reconstruction source=esub_adding_gp_form}}
 

Latest revision as of 19:41, 17 March 2021

Reaction 1.1.1.8-RXN

  • common-name:
    • glycerol 3-phosphate dehydrogenase
    • glycerol-3-phosphate dehydrogenase [nad+]
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7411, phosphatidate biosynthesis (yeast):
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6118, glycerol-3-phosphate shuttle:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7385, 1,3-propanediol biosynthesis (engineered):
    • 5 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

Property "Common-name" (as page type) with input value "glycerol-3-phosphate dehydrogenase [nad+" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.





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