Difference between revisions of "1.2.1.13-RXN"

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(Created page with "Category:reaction == Reaction N-CARBAMOYLPUTRESCINE-AMIDASE-RXN == * common-name: ** n-carbamoylputrescine amidohydrolase * ec-number: ** [http://enzyme.expasy.org/EC/3.5....")
(Created page with "Category:reaction == Reaction 1.2.1.13-RXN == * direction: ** left-to-right * ec_number: ** ec-1.2.1.13 == Reaction formula == * 1 DPG[c] '''+''' 1 NADPH[c] '''+''...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction N-CARBAMOYLPUTRESCINE-AMIDASE-RXN ==
+
== Reaction 1.2.1.13-RXN ==
−
* common-name:
 
−
** n-carbamoylputrescine amidohydrolase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/3.5.1.53 ec-3.5.1.53]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* ec_number:
 +
** ec-1.2.1.13
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-597]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PUTRESCINE]][c]
+
* 1 [[DPG]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[GAP]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_05075]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[ARGDEG-III-PWY]], L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway):
+
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''12''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-43]], putrescine biosynthesis II:
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR96800
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR100041
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22285 22285]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10298 10298]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01152 R01152]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01063 R01063]
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{{#set: common-name=n-carbamoylputrescine amidohydrolase}}
+
* UNIPROT:
−
{{#set: ec-number=ec-3.5.1.53}}
+
** [http://www.uniprot.org/uniprot/P09672 P09672]
 +
** [http://www.uniprot.org/uniprot/P09094 P09094]
 +
** [http://www.uniprot.org/uniprot/P12858 P12858]
 +
** [http://www.uniprot.org/uniprot/P12859 P12859]
 +
** [http://www.uniprot.org/uniprot/P12860 P12860]
 +
** [http://www.uniprot.org/uniprot/P09315 P09315]
 +
** [http://www.uniprot.org/uniprot/P25856 P25856]
 +
** [http://www.uniprot.org/uniprot/Q7M1R8 Q7M1R8]
 +
** [http://www.uniprot.org/uniprot/Q7M1R7 Q7M1R7]
 +
** [http://www.uniprot.org/uniprot/Q37174 Q37174]
 +
** [http://www.uniprot.org/uniprot/P30724 P30724]
 +
** [http://www.uniprot.org/uniprot/P80505 P80505]
 +
** [http://www.uniprot.org/uniprot/Q55245 Q55245]
 +
** [http://www.uniprot.org/uniprot/O22534 O22534]
 +
** [http://www.uniprot.org/uniprot/P50362 P50362]
 +
** [http://www.uniprot.org/uniprot/P19866 P19866]
 +
** [http://www.uniprot.org/uniprot/Q41019 Q41019]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: ec_number=ec-1.2.1.13}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb gene associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction comment=annotation}}
 +
{{#set: reconstruction source=esub_adding_annot_form}}

Latest revision as of 19:38, 17 March 2021

Reaction 1.2.1.13-RXN

  • direction:
    • left-to-right
  • ec_number:
    • ec-1.2.1.13

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • CALVIN-PWY, Calvin-Benson-Bassham cycle:
    • 12 reactions found over 13 reactions in the full pathway

Reconstruction information

External links





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