Difference between revisions of "2.3.1.179-RXN"

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(Created page with "Category:reaction == Reaction RXN-11662 == * common-name: ** (s)-3-hydroxybutanoyl-coa dehydrogeanse ** 3-hydroxyacyl-coa dehydrogenase * ec-number: ** [http://enzyme.expa...")
(Created page with "Category:reaction == Reaction 2.3.1.179-RXN == * direction: ** left-to-right * ec_number: ** ec-2.3.1.179 == Reaction formula == * 1 MALONYL-ACP[c] '''+''' 1 [[PROTON]...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-11662 ==
+
== Reaction 2.3.1.179-RXN ==
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* common-name:
 
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** (s)-3-hydroxybutanoyl-coa dehydrogeanse
 
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** 3-hydroxyacyl-coa dehydrogenase
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/1.1.1.35 ec-1.1.1.35]
 
 
* direction:
 
* direction:
−
** reversible
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** left-to-right
 +
* ec_number:
 +
** ec-2.3.1.179
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[NAD]][c] '''+''' 1 [[S-3-HYDROXYBUTANOYL-COA]][c] '''<=>''' 1 [[ACETOACETYL-COA]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Palmitoleoyl-ACPs]][c] '''=>''' 1 [[3-oxo-cis-vaccenoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[E_subulatus_02116]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[E_subulatus_04640]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-5973]], cis-vaccenate biosynthesis:
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* [[PWY-7778]], 2-methylpropene degradation:
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** '''5''' reactions found over '''5''' reactions in the full pathway
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** '''3''' reactions found over '''8''' reactions in the full pathway
 
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* [[CENTFERM-PWY]], pyruvate fermentation to butanoate:
 
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** '''4''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7216]], (R)- and (S)-3-hydroxybutanoate biosynthesis (engineered):
 
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** '''3''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-6883]], pyruvate fermentation to butanol II (engineered):
 
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** '''4''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-6583]], pyruvate fermentation to butanol I:
 
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** '''6''' reactions found over '''8''' reactions in the full pathway
 
−
* [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate):
 
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** '''5''' reactions found over '''10''' reactions in the full pathway
 
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* [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate):
 
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** '''4''' reactions found over '''15''' reactions in the full pathway
 
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* [[PWY-6863]], pyruvate fermentation to hexanol (engineered):
 
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** '''6''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle:
 
−
** '''9''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-7779]], methyl tert-butyl ether degradation:
 
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** '''2''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5177]], glutaryl-CoA degradation:
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
</div>
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[esub_adding_gp_form]]; tool: [[curation]]; comment: gap-filling
−
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* METANETX-RXN : MNXR100541
+
* METANETX-RXN : MNXR115071
 
* RHEA:
 
* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30802 30802]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14566 14566]
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* LIGAND-RXN:
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{{#set: direction=left-to-right}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01975 R01975]
+
{{#set: ec_number=ec-2.3.1.179}}
−
{{#set: common-name=(s)-3-hydroxybutanoyl-coa dehydrogeanse|3-hydroxyacyl-coa dehydrogenase}}
+
{{#set: nb gene associated=0}}
−
{{#set: ec-number=ec-1.1.1.35}}
+
{{#set: nb pathway associated=1}}
−
{{#set: direction=reversible}}
+
{{#set: reconstruction category=manual}}
−
{{#set: nb gene associated=2}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: nb pathway associated=11}}
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{{#set: reconstruction comment=gap-filling}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction source=esub_adding_gp_form}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
 

Latest revision as of 19:39, 17 March 2021

Reaction 2.3.1.179-RXN

  • direction:
    • left-to-right
  • ec_number:
    • ec-2.3.1.179

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5973, cis-vaccenate biosynthesis:
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR115071
  • RHEA:





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