Difference between revisions of "3-OXOACYL-ACP-SYNTH-RXN"

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(Created page with "Category:reaction == Reaction RXN66-320 == * ec-number: ** [http://enzyme.expasy.org/EC/5.3.3.5 ec-5.3.3.5] * direction: ** reversible == Reaction formula == * 1 5-ALPHA...")
(Created page with "Category:reaction == Reaction 3-OXOACYL-ACP-SYNTH-RXN == * common-name: ** β-ketoacyl-acp synthase ** 3-oxoacyl-[acyl-carrier-protein] synthase * ec-number: ** [http:...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN66-320 ==
+
== Reaction 3-OXOACYL-ACP-SYNTH-RXN ==
 +
* common-name:
 +
** β-ketoacyl-acp synthase
 +
** 3-oxoacyl-[acyl-carrier-protein] synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.3.3.5 ec-5.3.3.5]
+
** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179]
 +
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[5-ALPHA-CHOLESTA-724-DIEN-3-BETA-OL]][c] '''<=>''' 1 [[ZYMOSTEROL]][c]
+
* 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Saturated-Fatty-Acyl-ACPs]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[B-KETOACYL-ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[EsuFWS87_17]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** Category: [[manual]]
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* Gene: [[E_subulatus_15038]]
−
*** Source: [[reactions_add_esub]], Tool: [[unknown-tool]], Assignment: n.a, Comment: curation sterols (girard et al.)
+
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_15037]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_13006]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_22266]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_08948]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_13005]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_13004]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_22265]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY66-4]], cholesterol biosynthesis III (via desmosterol):
+
* [[FASYN-ELONG-PWY]], fatty acid elongation -- saturated:
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY66-341]], cholesterol biosynthesis I:
 
−
** '''5''' reactions found over '''18''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_esub]]; tool: [[curation]]; comment: curation sterols (girard et al.)
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR109128
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* RHEA:
+
* METANETX-RXN : MNXR115237
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34000 34000]
+
* UNIPROT:
−
* LIGAND-RXN:
+
** [http://www.uniprot.org/uniprot/P23902 P23902]
−
** [http://www.genome.jp/dbget-bin/www_bget?R04804 R04804]
+
** [http://www.uniprot.org/uniprot/P0A6R0 P0A6R0]
−
{{#set: ec-number=ec-5.3.3.5}}
+
** [http://www.uniprot.org/uniprot/P49327 P49327]
−
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/P43710 P43710]
−
{{#set: nb gene associated=1}}
+
** [http://www.uniprot.org/uniprot/Q9HYR2 Q9HYR2]
−
{{#set: nb pathway associated=2}}
+
** [http://www.uniprot.org/uniprot/O67612 O67612]
−
{{#set: reconstruction category=manual}}
+
** [http://www.uniprot.org/uniprot/P20582 P20582]
−
{{#set: reconstruction tool=curation}}
+
** [http://www.uniprot.org/uniprot/Q9JT63 Q9JT63]
−
{{#set: reconstruction comment=curation sterols (girard et al.)}}
+
** [http://www.uniprot.org/uniprot/Q9JW56 Q9JW56]
−
{{#set: reconstruction source=reactions_add_esub}}
+
** [http://www.uniprot.org/uniprot/Q9PMZ6 Q9PMZ6]
 +
** [http://www.uniprot.org/uniprot/P43711 P43711]
 +
** [http://www.uniprot.org/uniprot/O25284 O25284]
 +
** [http://www.uniprot.org/uniprot/Q9JX65 Q9JX65]
 +
** [http://www.uniprot.org/uniprot/O34340 O34340]
 +
** [http://www.uniprot.org/uniprot/Q9PI63 Q9PI63]
 +
** [http://www.uniprot.org/uniprot/P0AAI5 P0AAI5]
 +
** [http://www.uniprot.org/uniprot/Q07510 Q07510]
 +
** [http://www.uniprot.org/uniprot/Q06097 Q06097]
 +
** [http://www.uniprot.org/uniprot/P41175 P41175]
 +
** [http://www.uniprot.org/uniprot/P31176 P31176]
 +
** [http://www.uniprot.org/uniprot/Q40027 Q40027]
 +
** [http://www.uniprot.org/uniprot/Q40028 Q40028]
 +
** [http://www.uniprot.org/uniprot/P73283 P73283]
 +
** [http://www.uniprot.org/uniprot/P0A953 P0A953]
 +
** [http://www.uniprot.org/uniprot/O64485 O64485]
 +
** [http://www.uniprot.org/uniprot/O65677 O65677]
 +
** [http://www.uniprot.org/uniprot/Q39310 Q39310]
 +
** [http://www.uniprot.org/uniprot/O23738 O23738]
 +
** [http://www.uniprot.org/uniprot/Q41134 Q41134]
 +
** [http://www.uniprot.org/uniprot/Q41135 Q41135]
 +
** [http://www.uniprot.org/uniprot/Q54208 Q54208]
 +
** [http://www.uniprot.org/uniprot/O54440 O54440]
 +
** [http://www.uniprot.org/uniprot/P55338 P55338]
 +
** [http://www.uniprot.org/uniprot/Q9RA31 Q9RA31]
 +
** [http://www.uniprot.org/uniprot/P12276 P12276]
 +
** [http://www.uniprot.org/uniprot/P12785 P12785]
 +
</div>
 +
{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] synthase|&beta;-ketoacyl-acp synthase}}
 +
{{#set: ec-number=ec-2.3.1.85|ec-2.3.1.86|ec-2.3.1.179|ec-2.3.1.41}}
 +
{{#set: direction=left-to-right}}
 +
{{#set: nb gene associated=8}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:41, 17 March 2021

Reaction 3-OXOACYL-ACP-SYNTH-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • FASYN-ELONG-PWY, fatty acid elongation -- saturated:
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.





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