Difference between revisions of "4.2.1.61-RXN"

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(Created page with "Category:reaction == Reaction RXN-14973 == * direction: ** left-to-right == Reaction formula == * 1 3-Oxo-octanoyl-ACPs[c] '''+''' 2 NADPH[c] '''+''' 2 PROTON[...")
(Created page with "Category:reaction == Reaction 4.2.1.61-RXN == * common-name: ** (3r)-3-hydroxypalmitoyl-[acyl-carrier protein] dehydratase * ec-number: ** [http://enzyme.expasy.org/EC/2.3...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14973 ==
+
== Reaction 4.2.1.61-RXN ==
 +
* common-name:
 +
** (3r)-3-hydroxypalmitoyl-[acyl-carrier protein] dehydratase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* synonymous:
 +
** β-hydroxypalmitoyl thioester dehydratase
 +
** (3r)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)
 +
** β-hydroxypalmitoyl-acyl carrier protein dehydrase
 +
** (3r)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase
 +
** d-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase
 +
** β-hydroxypalmityl-acp dehydrase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-Oxo-octanoyl-ACPs]][c] '''+''' 2 [[NADPH]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[NADP]][c] '''+''' 1 [[Octanoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[R-3-Hydroxypalmitoyl-ACPs]][c] '''=>''' 1 [[2-Hexadecenoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[E_subulatus_18602]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_15037]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_15038]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast):
+
* [[PWY-5971]], palmitate biosynthesis (type II fatty acid synthase):
−
** '''9''' reactions found over '''11''' reactions in the full pathway
+
** '''30''' reactions found over '''31''' reactions in the full pathway
 +
* [[PWY-5994]], palmitate biosynthesis (type I fatty acid synthase):
 +
** '''30''' reactions found over '''31''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR115600
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04462 R04462]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P49327 P49327]
 +
** [http://www.uniprot.org/uniprot/P07149 P07149]
 +
** [http://www.uniprot.org/uniprot/P12276 P12276]
 +
** [http://www.uniprot.org/uniprot/P12785 P12785]
 +
{{#set: common-name=(3r)-3-hydroxypalmitoyl-[acyl-carrier protein] dehydratase}}
 +
{{#set: ec-number=ec-4.2.1.59|ec-2.3.1.85|ec-2.3.1.86}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=0}}
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{{#set: synonymous=β-hydroxypalmitoyl thioester dehydratase|(3r)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase|(3r)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)|β-hydroxypalmityl-acp dehydrase|β-hydroxypalmitoyl-acyl carrier protein dehydrase|d-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=3}}
−
{{#set: reconstruction category=manual}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction comment=annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esub_adding_annot_form}}
+
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:41, 17 March 2021

Reaction 4.2.1.61-RXN

  • common-name:
    • (3r)-3-hydroxypalmitoyl-[acyl-carrier protein] dehydratase
  • ec-number:
  • direction:
    • left-to-right
  • synonymous:
    • β-hydroxypalmitoyl thioester dehydratase
    • (3r)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)
    • β-hydroxypalmitoyl-acyl carrier protein dehydrase
    • (3r)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase
    • d-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase
    • β-hydroxypalmityl-acp dehydrase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5971, palmitate biosynthesis (type II fatty acid synthase):
    • 30 reactions found over 31 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis (type I fatty acid synthase):
    • 30 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

Property "Common-name" (as page type) with input value "(3r)-3-hydroxypalmitoyl-[acyl-carrier protein] dehydratase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.


  • Property "Synonymous" (as page type) with input value "(3r)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Synonymous" (as page type) with input value "(3r)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Synonymous" (as page type) with input value "d-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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