Difference between revisions of "Category:Pathway"

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(Created page with "Category:reaction == Reaction RXN-12090 == * common-name: ** n1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming) * ec-number: ** [http://enzyme.expasy....")
(Created page with "{{#ask: Category:pathway | ?common-name | ?nb reaction found | ?nb total reaction | ?completion rate |sort=completion rate, nb total reaction |order=descending }}")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
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{{#ask: [[Category:pathway]]
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== Reaction RXN-12090 ==
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| ?common-name
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* common-name:
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| ?nb reaction found
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** n1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming)
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| ?nb total reaction
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* ec-number:
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| ?completion rate
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** [http://enzyme.expasy.org/EC/1.5.3.17 ec-1.5.3.17]
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|sort=completion rate, nb total reaction
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* direction:
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|order=descending
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** left-to-right
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}}
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== Reaction formula ==
 
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* 1 [[N1-ACETYLSPERMINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-10687]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[SPERMIDINE]][c]
 
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== Gene(s) associated with this reaction  ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* Gene: [[E_subulatus_12936]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[E_subulatus_18411]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[E_subulatus_18405]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[E_subulatus_17393]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[E_subulatus_20664]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_18629]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[E_subulatus_03592]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_05915]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_17392]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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</div>
 
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== Pathway(s)  ==
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25801 25801]
 
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{{#set: common-name=n1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming)}}
 
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{{#set: ec-number=ec-1.5.3.17}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: nb gene associated=9}}
 
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{{#set: nb pathway associated=0}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=ectocarpus_subulatus}}
 

Latest revision as of 19:37, 17 March 2021

 Common-nameNb reaction foundNb total reactionCompletion rate
P224-PWYDissimilatory sulfate reduction ii (to thiosulfate)2N.aN.a
PWY-6196D-serine metabolism1N.aN.a
PWY0-1415Superpathway of heme b biosynthesis from uroporphyrinogen-iii4N.aN.a
PWY-5965Fatty acid biosynthesis initiation iii1N.aN.a
PWY-82382N.aN.a
PWY-5664Erythro-tetrahydrobiopterin biosynthesis ii1N.aN.a
PWY66-422D-galactose degradation v (leloir pathway)5N.aN.a
PWY-7235Superpathway of ubiquinol-6 biosynthesis (eukaryotic)1N.aN.a
PWY-5966Fatty acid biosynthesis initiation ii2N.aN.a
PWY0-1534Hydrogen sulfide biosynthesis i1N.aN.a
PWY-6305Putrescine biosynthesis iv3N.aN.a
PWY-4981L-proline biosynthesis ii (from arginine)422.0
HOMOCYSDEGR-PWYL-cysteine biosynthesis iii (from l-homocysteine)422.0
PWY-3341L-proline biosynthesis iii531.67
PWY-5041S-adenosyl-l-methionine cycle ii431.33
PHESYNL-phenylalanine biosynthesis i431.33
PWY-5913Partial tca cycle (obligate autotrophs)1081.25
PWY-2201Folate transformations i12101.2
PWY-6163Chorismate biosynthesis from 3-dehydroquinate651.2
PWY-882L-ascorbate biosynthesis i (l-galactose pathway)651.2
PWY-6823Molybdenum cofactor biosynthesis761.17
PWY-7434Terminal o-glycans residues modification (via type 2 precursor disaccharide)981.12
PWY-6969Tca cycle v (2-oxoglutarate:ferredoxin oxidoreductase)1091.11
P105-PWYTca cycle iv (2-oxoglutarate decarboxylase)1091.11
PWY-6520Nonaprenyl diphosphate biosynthesis ii111.0
PWY-5640Nitrobenzene degradation ii111.0
PWY0-662Prpp biosynthesis111.0
GLUTAMATE-DEG1-PWYL-glutamate degradation i111.0
PWY-6348Phosphate acquisition111.0
PWY0-1021L-alanine biosynthesis iii111.0
ASPARTATE-DEG1-PWYL-aspartate degradation i111.0
PWY0-1299Arginine dependent acid resistance111.0
COA-PWY-1Superpathway of coenzyme a biosynthesis iii (mammals)111.0
PWY-6745Phytochelatins biosynthesis111.0
PWY-5512Udp-n-acetyl-d-galactosamine biosynthesis i111.0
PWY0-1313Acetate conversion to acetyl-coa111.0
GLUTSYNIII-PWYL-glutamate biosynthesis iii111.0
PWY-4341L-glutamate biosynthesis v111.0
GLUTAMINEFUM-PWYL-glutamine degradation ii111.0
PWY0-1301Melibiose degradation111.0
PWY-5326Sulfite oxidation iv111.0
GLYSYN-ALA-PWYGlycine biosynthesis iii111.0
PWY-5704Urea degradation ii111.0
PWY-7980Atp biosynthesis111.0
PWY-4861Udp-α-d-galacturonate biosynthesis i (from udp-d-glucuronate)111.0
PWY-5122Geranyl diphosphate biosynthesis111.0
PWY-5766L-glutamate degradation x111.0
PWY-5143Long-chain fatty acid activation111.0
PWY-7686L-malate degradation ii111.0
MANNIDEG-PWYMannitol degradation i111.0
... further results

Pages in category "Pathway"

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