Difference between revisions of "RXN-11519"

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(Created page with "Category:reaction == Reaction RXN1G-499 == * common-name: ** 3-oxo-lignoceroyl-[acyl-carrier protein] synthase ** 3-oxo-lignoceroyl-[acp] synthase ** 3-oxoacyl-[acyl-carri...")
(Created page with "Category:reaction == Reaction RXN-11519 == * direction: ** left-to-right == Reaction formula == * 1 3-7-DIMETHYLXANTHINE[c] '''+''' 1 OXYGEN-MOLECULE[c] '''+''' 1...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN1G-499 ==
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== Reaction RXN-11519 ==
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* common-name:
 
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** 3-oxo-lignoceroyl-[acyl-carrier protein] synthase
 
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** 3-oxo-lignoceroyl-[acp] synthase
 
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** 3-oxoacyl-[acyl-carrier-protein] synthase
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[Behenoyl-ACPs]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-lignoceroyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
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* 1 [[3-7-DIMETHYLXANTHINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-12482]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[E_subulatus_22265]]
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* Gene: [[E_subulatus_07435]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[E_subulatus_22266]]
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* Gene: [[E_subulatus_07434]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[E_subulatus_13005]]
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* Gene: [[E_subulatus_00870]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[E_subulatus_13004]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_13006]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[E_subulatus_08948]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWYG-321]], mycolate biosynthesis:
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* [[PWY-6632]], caffeine degradation IV (bacteria, via demethylation and oxidation):
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** '''43''' reactions found over '''205''' reactions in the full pathway
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** '''4''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
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* METANETX-RXN : MNXR123586
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* METANETX-RXN : MNXR111561
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{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] synthase|3-oxo-lignoceroyl-[acp] synthase|3-oxo-lignoceroyl-[acyl-carrier protein] synthase}}
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* LIGAND-RXN:
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{{#set: ec-number=ec-2.3.1.41}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07978 R07978]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: nb gene associated=6}}
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{{#set: nb gene associated=3}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=ectocarpus_subulatus}}
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{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}

Latest revision as of 19:39, 17 March 2021

Reaction RXN-11519

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6632, caffeine degradation IV (bacteria, via demethylation and oxidation):
    • 4 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR111561
  • LIGAND-RXN:




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