Difference between revisions of "FSU RS10865"

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(Created page with "Category:reaction == Reaction AMINOLEVULINATE-AMINOTRANSFERASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.43 ec-2.6.1.43] * direction: ** reversible == Reac...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PYRUVATE-CARBOXYLASE-RXN ==
+
== Reaction AMINOLEVULINATE-AMINOTRANSFERASE-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.4.1.1 ec-6.4.1.1]
+
** [http://enzyme.expasy.org/EC/2.6.1.43 ec-2.6.1.43]
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[PYRUVATE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[5-AMINO-LEVULINATE]][c] '''+''' 1 [[PYRUVATE]][c] '''<=>''' 1 [[CPD-473]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS06125]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[P42-PWY]], incomplete reductive TCA cycle:
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY66-399]], gluconeogenesis III:
 
−
** '''10''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum):
 
−
** '''8''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-6146]], Methanobacterium thermoautotrophicum biosynthetic metabolism:
 
−
** '''8''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[manual]]; source: [[reactions_add_gp]]; tool: [[curation]]; comment: added for gap-filling
−
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20845 20845]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12483 12483]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00344 R00344]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02271 R02271]
−
* UNIPROT:
+
{{#set: ec-number=ec-2.6.1.43}}
−
** [http://www.uniprot.org/uniprot/Q05920 Q05920]
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/Q9PNQ4 Q9PNQ4]
+
{{#set: nb gene associated=0}}
−
** [http://www.uniprot.org/uniprot/P95127 P95127]
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/Q9PP00 Q9PP00]
+
{{#set: reconstruction category=manual}}
−
** [http://www.uniprot.org/uniprot/Q9CHQ7 Q9CHQ7]
+
{{#set: reconstruction tool=curation}}
−
** [http://www.uniprot.org/uniprot/Q9KWU4 Q9KWU4]
+
{{#set: reconstruction comment=added for gap-filling}}
−
** [http://www.uniprot.org/uniprot/P11498 P11498]
+
{{#set: reconstruction source=reactions_add_gp}}
−
** [http://www.uniprot.org/uniprot/P52873 P52873]
 
−
** [http://www.uniprot.org/uniprot/P11154 P11154]
 
−
** [http://www.uniprot.org/uniprot/P32327 P32327]
 
−
** [http://www.uniprot.org/uniprot/O17732 O17732]
 
−
** [http://www.uniprot.org/uniprot/Q9UUE1 Q9UUE1]
 
−
** [http://www.uniprot.org/uniprot/Q16921 Q16921]
 
−
** [http://www.uniprot.org/uniprot/Q9XBJ1 Q9XBJ1]
 
−
{{#set: ec-number=ec-6.4.1.1}}
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=orthology}}
 
−
{{#set: reconstruction tool=orthofinder}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=faecalibacterium|bthetaiotaomicron}}
 

Revision as of 22:00, 24 July 2020

Reaction AMINOLEVULINATE-AMINOTRANSFERASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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