Difference between revisions of "FISUC RS14280"

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(Created page with "Category:metabolite == Metabolite Orthophosphoric-Monoesters == * common-name: ** a phosphate monoester == Reaction(s) known to consume the compound == * ACID-PHOSPHATAS...")
 
(Created page with "Category:reaction == Reaction RIBOFLAVINKIN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.26 ec-2.7.1.26] * direction: ** left-to-right * common-name: ** ribof...")
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[[Category:metabolite]]
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[[Category:reaction]]
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== Metabolite Orthophosphoric-Monoesters ==
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== Reaction RIBOFLAVINKIN-RXN ==
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* ec-number:
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** [http://enzyme.expasy.org/EC/2.7.1.26 ec-2.7.1.26]
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* direction:
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** left-to-right
 
* common-name:
 
* common-name:
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** a phosphate monoester
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** riboflavin biosynthesis protein ribf
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== Reaction(s) known to consume the compound ==
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== Reaction formula ==
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* [[ACID-PHOSPHATASE-RXN]]
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* 1 [[ATP]][c] '''+''' 1 [[RIBOFLAVIN]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[FMN]][c] '''+''' 1 [[PROTON]][c]
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== Reaction(s) known to produce the compound ==
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== Gene(s) associated with this reaction  ==
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== Reaction(s) of unknown directionality ==
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* Gene: [[FSU_RS13525]]
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{{#set: common-name=a phosphate monoester}}
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** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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* Gene: [[FISUC_RS11560]]
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** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Pathway(s) ==
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* [[PWY-5523]], 5,6-dimethylbenzimidazole biosynthesis I (aerobic):
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7863]], roseoflavin biosynthesis:
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants):
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6168]], flavin biosynthesis III (fungi):
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[PWY66-366]], flavin biosynthesis IV (mammalian):
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
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* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
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* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14358 14358]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00549 R00549]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q9JVY5 Q9JVY5]
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** [http://www.uniprot.org/uniprot/Q9PHS7 Q9PHS7]
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** [http://www.uniprot.org/uniprot/Q59263 Q59263]
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{{#set: ec-number=ec-2.7.1.26}}
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{{#set: direction=left-to-right}}
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{{#set: common-name=riboflavin biosynthesis protein ribf}}
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{{#set: nb gene associated=2}}
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{{#set: nb pathway associated=5}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=orthofinder|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=plantarum|genome|ecoli|bthetaiotaomicron|faecalibacterium|bifidobacterium}}

Revision as of 22:04, 24 July 2020

Reaction RIBOFLAVINKIN-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • riboflavin biosynthesis protein ribf

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5523, 5,6-dimethylbenzimidazole biosynthesis I (aerobic):
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7863, roseoflavin biosynthesis:
    • 1 reactions found over 7 reactions in the full pathway
  • RIBOSYN2-PWY, flavin biosynthesis I (bacteria and plants):
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6168, flavin biosynthesis III (fungi):
    • 7 reactions found over 9 reactions in the full pathway
  • PWY66-366, flavin biosynthesis IV (mammalian):
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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