Difference between revisions of "FISUC RS07620"

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(Created page with "Category:reaction == Reaction 2.7.7.15-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.7.15 ec-2.7.7.15] * direction: ** left-to-right == Reaction formula == * 1 [...")
 
(Created page with "Category:reaction == Reaction RXN-20081 == * direction: ** left-to-right * common-name: ** asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata ** asp-trna(asn)/glu-t...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.7.7.15-RXN ==
+
== Reaction RXN-20081 ==
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* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.7.7.15 ec-2.7.7.15]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata
 +
** asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc
 +
** asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[CTP]][c] '''+''' 1 [[PHOSPHORYL-CHOLINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CDP-CHOLINE]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[4-Phosphooxy-L-aspartyl-tRNAAsn]][c] '''+''' 1 [[AMMONIUM]][c] '''=>''' 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[FSU_RS01725]]
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* Gene: [[FSU_RS14325]]
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** Category: [[manual]]
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** Category: [[annotation]]
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*** Source: [[reactions_add_43_emile_ortho_meta]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the orthology part of the emile network.
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FISUC_RS14410]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FISUC_RS12775]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FISUC_RS12355]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FSU_RS00600]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FSU_RS14750]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-3561]], choline biosynthesis III:
+
* [[PWY490-4]], L-asparagine biosynthesis III (tRNA-dependent):
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** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY4FS-2]], phosphatidylcholine biosynthesis II:
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY3O-450]], phosphatidylcholine biosynthesis I:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7782]], plasmalogen biosynthesis:
 
−
** '''2''' reactions found over '''16''' reactions in the full pathway
 
−
* [[PWY-7886]], cell-surface glycoconjugate-linked phosphocholine biosynthesis:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7818]], type IV lipoteichoic acid biosynthesis (S. pneumoniae):
 
−
** '''1''' reactions found over '''19''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_43_emile_ortho_meta]]; tool: [[curation]]; comment: present in the orthology part of the emile network.
+
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18998 18998]
 
−
* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01890 R01890]
 
−
* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P19836 P19836]
 
−
** [http://www.uniprot.org/uniprot/P49586 P49586]
 
−
** [http://www.uniprot.org/uniprot/P49584 P49584]
 
−
** [http://www.uniprot.org/uniprot/P49585 P49585]
 
−
** [http://www.uniprot.org/uniprot/P49587 P49587]
 
−
** [http://www.uniprot.org/uniprot/P93470 P93470]
 
−
** [http://www.uniprot.org/uniprot/Q42619 Q42619]
 
−
** [http://www.uniprot.org/uniprot/Q42620 Q42620]
 
−
** [http://www.uniprot.org/uniprot/Q42621 Q42621]
 
−
** [http://www.uniprot.org/uniprot/Q42622 Q42622]
 
−
** [http://www.uniprot.org/uniprot/P13259 P13259]
 
−
{{#set: ec-number=ec-2.7.7.15}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
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{{#set: common-name=asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb|asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc|asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb gene associated=6}}
−
{{#set: reconstruction category=manual}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction comment=present in the orthology part of the emile network.}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=reactions_add_43_emile_ortho_meta}}
+
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=genome}}

Revision as of 22:05, 24 July 2020

Reaction RXN-20081

  • direction:
    • left-to-right
  • common-name:
    • asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata
    • asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc
    • asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY490-4, L-asparagine biosynthesis III (tRNA-dependent):
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS07620&oldid=12741"