Difference between revisions of "Negatively-super-coiled-DNAs"

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(Created page with "Category:metabolite == Metabolite PHOSPHORIBOSYL-FORMAMIDO-CARBOXAMIDE == * common-name: ** 5-formamido-1-(5-phospho-d-ribosyl)-imidazole-4-carboxamide * inchi-key: ** abc...")
(Created page with "Category:gene == Gene FSU_RS14010 == * transcription-direction: ** positive * centisome-position: ** 88.71352 * left-end-position: ** 3409264 * right-end-position: **...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite PHOSPHORIBOSYL-FORMAMIDO-CARBOXAMIDE ==
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== Gene FSU_RS14010 ==
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* common-name:
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* transcription-direction:
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** 5-formamido-1-(5-phospho-d-ribosyl)-imidazole-4-carboxamide
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** positive
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* inchi-key:
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* centisome-position:
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** abcooorlyaoboz-kqynxxcusa-l
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** 88.71352   
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* molecular-weight:
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* left-end-position:
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** 364.208
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** 3409264
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* smiles:
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* right-end-position:
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** c(op([o-])(=o)[o-])[c@h]2([c@@h](o)[c@@h](o)[c@h](n1(c=nc(\c(=o)n)=c(nc=o)/1))o2)
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** 3410430
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[AICARTRANSFORM-RXN]]
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* [[fibrobacter_27082020]]
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* [[IMPCYCLOHYDROLASE-RXN]]
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== Reaction(s) associated ==
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* [[R04560]]
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* [[PGLYCDEHYDROG-RXN]]
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== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
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* [[AICARTRANSFORM-RXN]]
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*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[IMPCYCLOHYDROLASE-RXN]]
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** Category: [[orthology]]
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* [[R04560]]
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*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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{{#set: common-name=5-formamido-1-(5-phospho-d-ribosyl)-imidazole-4-carboxamide}}
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*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
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{{#set: inchi-key=inchikey=abcooorlyaoboz-kqynxxcusa-l}}
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== Pathway(s) associated ==
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{{#set: molecular-weight=364.208}}
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* [[PWY-8010]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[SERSYN-PWY]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: centisome-position=88.71352    }}
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{{#set: left-end-position=3409264}}
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{{#set: right-end-position=3410430}}
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{{#set: organism associated=fibrobacter_27082020}}
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{{#set: nb reaction associated=1}}
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{{#set: nb pathway associated=2}}

Revision as of 09:51, 27 August 2020

Gene FSU_RS14010

  • transcription-direction:
    • positive
  • centisome-position:
    • 88.71352
  • left-end-position:
    • 3409264
  • right-end-position:
    • 3410430

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-8010
    • 2 reactions found over 3 reactions in the full pathway
  • SERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway




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