Difference between revisions of "FISUC RS07620"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-20081 == * direction: ** left-to-right * common-name: ** asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata ** asp-trna(asn)/glu-t...")
(Created page with "Category:reaction == Reaction 1.2.7.8-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.2.7.8 ec-1.2.7.8] * direction: ** left-to-right * common-name: ** thiamine pyro...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-20081 ==
+
== Reaction 1.2.7.8-RXN ==
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.2.7.8 ec-1.2.7.8]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata
+
** thiamine pyrophosphate-binding protein
** asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc
 
** asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[4-Phosphooxy-L-aspartyl-tRNAAsn]][c] '''+''' 1 [[AMMONIUM]][c] '''=>''' 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[CO-A]][c] '''+''' 1 [[INDOLE_PYRUVATE]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[S-2-INDOL-3-YLACETYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FSU_RS14325]]
+
* Gene: [[FISUC_RS06185]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[FISUC_RS14410]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
* Gene: [[FISUC_RS12775]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
* Gene: [[FISUC_RS12355]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
* Gene: [[FSU_RS00600]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
* Gene: [[FSU_RS14750]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY490-4]], L-asparagine biosynthesis III (tRNA-dependent):
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R07161 R07161]
 +
{{#set: ec-number=ec-1.2.7.8}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb|asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc|asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata}}
+
{{#set: common-name=thiamine pyrophosphate-binding protein}}
{{#set: nb gene associated=6}}
+
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=genome}}
 
{{#set: reconstruction source=genome}}

Revision as of 10:05, 27 August 2020

Reaction 1.2.7.8-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • thiamine pyrophosphate-binding protein

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links