Difference between revisions of "FISUC RS07440"

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(Created page with "Category:reaction == Reaction GLUTSEMIALDEHYDROG-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.41 ec-1.2.1.41] * direction: ** left-to-right * common-name: **...")
 
(Created page with "Category:reaction == Reaction RXN-15733 == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.6.3 ec-2.7.6.3] * direction: ** left-to-right * common-name: ** 2-amino-4-hydro...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUTSEMIALDEHYDROG-RXN ==
+
== Reaction RXN-15733 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.2.1.41 ec-1.2.1.41]
+
** [http://enzyme.expasy.org/EC/2.7.6.3 ec-2.7.6.3]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** glutamate-5-semialdehyde dehydrogenase
+
** 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-GLUTAMATE-5-P]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CPD-16953]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-16954]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS01505]]
+
* Gene: [[FSU_RS14195]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[FISUC_RS12225]]
−
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[FISUC_RS15310]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[CITRULBIO-PWY]], L-citrulline biosynthesis:
+
* [[PWY-6148]], tetrahydromethanopterin biosynthesis:
−
** '''7''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''14''' reactions in the full pathway
−
* [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II:
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6922]], L-Nδ-acetylornithine biosynthesis:
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-3341]], L-proline biosynthesis III:
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PROSYN-PWY]], L-proline biosynthesis I:
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: ec-number=ec-2.7.6.3}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19543 19543]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03313 R03313]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9JUK8 Q9JUK8]
 
−
** [http://www.uniprot.org/uniprot/P45121 P45121]
 
−
** [http://www.uniprot.org/uniprot/P53000 P53000]
 
−
** [http://www.uniprot.org/uniprot/P07004 P07004]
 
−
** [http://www.uniprot.org/uniprot/P17857 P17857]
 
−
** [http://www.uniprot.org/uniprot/P45638 P45638]
 
−
** [http://www.uniprot.org/uniprot/P54885 P54885]
 
−
** [http://www.uniprot.org/uniprot/O04226 O04226]
 
−
{{#set: ec-number=ec-1.2.1.41}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=glutamate-5-semialdehyde dehydrogenase}}
+
{{#set: common-name=2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=orthofinder|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=plantarum|genome|faecalibacterium|bthetaiotaomicron|ecoli|bifidobacterium}}
+
{{#set: reconstruction source=genome}}

Revision as of 10:07, 27 August 2020

Reaction RXN-15733

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6148, tetrahydromethanopterin biosynthesis:
    • 2 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS07440&oldid=18418"