Difference between revisions of "FISUC RS08240"

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(Created page with "Category:reaction == Reaction RXN-8642 == <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> * direction: ** reversible * common-name:...")
(Created page with "Category:reaction == Reaction ExchangeSeed-CA+2 == * direction: ** reversible == Reaction formula == * 1.0 CA+2[C-BOUNDARY] '''<=>''' 1.0 CA+2[e] == Gene(s) associ...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-8642 ==
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== Reaction ExchangeSeed-CA+2 ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* direction:
 
* direction:
 
** reversible
 
** reversible
* common-name:
 
** nadp-dependent isocitrate dehydrogenase
 
* synonymous:
 
** nadp-specific isocitrate dehydrogenase
 
** triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase
 
** nadp isocitric dehydrogenase
 
** isocitrate (nadp) dehydrogenase
 
** isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase
 
** idp
 
** idp1
 
** idp3
 
** idh (ambiguous)
 
** dual-cofactor-specific isocitrate dehydrogenase
 
** nadp+-icdh
 
** idp2
 
** nadp+-idh
 
** oxalsuccinic decarboxylase
 
** nadp+-linked isocitrate dehydrogenase
 
** isocitrate dehydrogenase (nadp-dependent)
 
** nadp-linked isocitrate dehydrogenase
 
** nadp-dependent isocitric dehydrogenase
 
</div>
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[OXALO-SUCCINATE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* 1.0 [[CA+2]][C-BOUNDARY] '''<=>''' 1.0 [[CA+2]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FSU_RS05290]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[FISUC_RS03400]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19384 19384]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00268 R00268]
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
{{#set: common-name=nadp-dependent isocitrate dehydrogenase}}
+
{{#set: nb gene associated=0}}
{{#set: synonymous=idh (ambiguous)|nadp-linked isocitrate dehydrogenase|idp3|idp2|triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase|nadp isocitric dehydrogenase|isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase|nadp+-idh|nadp+-linked isocitrate dehydrogenase|isocitrate dehydrogenase (nadp-dependent)|idp|nadp-specific isocitrate dehydrogenase|nadp-dependent isocitric dehydrogenase|dual-cofactor-specific isocitrate dehydrogenase|nadp+-icdh|oxalsuccinic decarboxylase|isocitrate (nadp) dehydrogenase|idp1}}
 
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
{{#set: reconstruction source=genome}}
+
{{#set: reconstruction source=import_from_medium}}

Revision as of 10:10, 10 September 2020

Reaction ExchangeSeed-CA+2

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links