Difference between revisions of "FISUC RS07620"

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(Created page with "Category:reaction == Reaction 1.2.7.8-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.2.7.8 ec-1.2.7.8] * direction: ** left-to-right * common-name: ** thiamine pyro...")
(Created page with "Category:reaction == Reaction IMPCYCLOHYDROLASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.5.4.10 ec-3.5.4.10] * direction: ** reversible * common-name: ** inos...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 1.2.7.8-RXN ==
+
== Reaction IMPCYCLOHYDROLASE-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.2.7.8 ec-1.2.7.8]
+
** [http://enzyme.expasy.org/EC/3.5.4.10 ec-3.5.4.10]
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** thiamine pyrophosphate-binding protein
+
** inosine monophosphate cyclohydrolase
 +
** imp cyclohydrolase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CO-A]][c] '''+''' 1 [[INDOLE_PYRUVATE]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[S-2-INDOL-3-YLACETYL-COA]][c]
+
* 1 [[IMP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[PHOSPHORIBOSYL-FORMAMIDO-CARBOXAMIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FISUC_RS06185]]
+
* Gene: [[FSU_RS00630]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
* Gene: [[FSU_RS00610]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FISUC_RS14440]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FISUC_RS14420]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7234]], inosine-5'-phosphate biosynthesis III:
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6123]], inosine-5'-phosphate biosynthesis I:
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6124]], inosine-5'-phosphate biosynthesis II:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18448 18448]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R07161 R07161]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01127 R01127]
−
{{#set: ec-number=ec-1.2.7.8}}
+
* UNIPROT:
−
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/P43852 P43852]
−
{{#set: common-name=thiamine pyrophosphate-binding protein}}
+
** [http://www.uniprot.org/uniprot/P12048 P12048]
−
{{#set: nb gene associated=1}}
+
** [http://www.uniprot.org/uniprot/P31335 P31335]
−
{{#set: nb pathway associated=0}}
+
** [http://www.uniprot.org/uniprot/P26978 P26978]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/P15639 P15639]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/Q9PNY2 Q9PNY2]
 +
** [http://www.uniprot.org/uniprot/Q9JUQ8 Q9JUQ8]
 +
** [http://www.uniprot.org/uniprot/P31939 P31939]
 +
{{#set: ec-number=ec-3.5.4.10}}
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=imp cyclohydrolase|inosine monophosphate cyclohydrolase}}
 +
{{#set: nb gene associated=4}}
 +
{{#set: nb pathway associated=3}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pathwaytools|orthofinder}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome}}
+
{{#set: reconstruction source=bifidobacterium|bthetaiotaomicron|ecoli|genome|faecalibacterium|plantarum}}

Revision as of 10:13, 10 September 2020

Reaction IMPCYCLOHYDROLASE-RXN

  • ec-number:
  • direction:
    • reversible
  • common-name:
    • inosine monophosphate cyclohydrolase
    • imp cyclohydrolase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7234, inosine-5'-phosphate biosynthesis III:
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-6123, inosine-5'-phosphate biosynthesis I:
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-6124, inosine-5'-phosphate biosynthesis II:
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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