Difference between revisions of "FISUC RS02925"

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(Created page with "Category:reaction == Reaction OXALODECARB-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.112 ec-4.1.1.112] * direction: ** left-to-right == Reaction formula ==...")
(Created page with "Category:reaction == Reaction RXN-7669 == * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.18 ec-2.4.1.18] * direction: ** left-to-right * common-name: ** 1,4-alpha-gluc...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction OXALODECARB-RXN ==
+
== Reaction RXN-7669 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.112 ec-4.1.1.112]
+
** [http://enzyme.expasy.org/EC/2.4.1.18 ec-2.4.1.18]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** 1,4-alpha-glucan branching protein glgb
 +
* synonymous:
 +
** amylo-(1,4-1,6)-transglycosylase
 +
** amylo-(1,4 to 1,6)transglucosidase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 1 [[POLY-GLUCOSYLATED-GLYCOGENINS]][c] '''=>''' 1 [[Glycogens]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS09880]]
+
* Gene: [[FSU_RS01770]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FSU_RS09935]]
+
* Gene: [[FISUC_RS15575]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[P184-PWY]], protocatechuate degradation I (meta-cleavage pathway):
+
* [[PWY-5067]], glycogen biosynthesis II (from UDP-D-Glucose):
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6339]], syringate degradation:
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[METHYLGALLATE-DEGRADATION-PWY]], methylgallate degradation:
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: ec-number=ec-2.4.1.18}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15642 15642]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00217 R00217]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P13187 P13187]
 
−
** [http://www.uniprot.org/uniprot/P13155 P13155]
 
−
** [http://www.uniprot.org/uniprot/P13156 P13156]
 
−
** [http://www.uniprot.org/uniprot/Q58628 Q58628]
 
−
{{#set: ec-number=ec-4.1.1.112}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
 +
{{#set: common-name=1,4-alpha-glucan branching protein glgb}}
 +
{{#set: synonymous=amylo-(1,4-1,6)-transglycosylase|amylo-(1,4 to 1,6)transglucosidase}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=orthofinder}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=faecalibacterium|ecoli|bthetaiotaomicron}}
+
{{#set: reconstruction source=genome}}

Revision as of 10:14, 10 September 2020

Reaction RXN-7669

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • 1,4-alpha-glucan branching protein glgb
  • synonymous:
    • amylo-(1,4-1,6)-transglycosylase
    • amylo-(1,4 to 1,6)transglucosidase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5067, glycogen biosynthesis II (from UDP-D-Glucose):
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS02925&oldid=23782"