Difference between revisions of "FISUC RS00115"

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(Created page with "Category:reaction == Reaction SHIKIMATE-KINASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.71 ec-2.7.1.71] * direction: ** left-to-right == Reaction formula...")
(Created page with "Category:reaction == Reaction GLYCEROL-2-PHOSPHATASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.19 ec-3.1.3.19] * direction: ** left-to-right == Reaction fo...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction SHIKIMATE-KINASE-RXN ==
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== Reaction GLYCEROL-2-PHOSPHATASE-RXN ==
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.7.1.71 ec-2.7.1.71]
+
** [http://enzyme.expasy.org/EC/3.1.3.19 ec-3.1.3.19]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[SHIKIMATE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SHIKIMATE-5P]][c]
+
* 1 [[CPD-536]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLYCEROL]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FSU_RS13250]]
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* Gene: [[FSU_RS00280]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
* Gene: [[FSU_RS13245]]
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* Gene: [[FSU_RS13430]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate:
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13124 13124]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13106 13106]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R02412 R02412]
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** [http://www.genome.jp/dbget-bin/www_bget?R01043 R01043]
* UNIPROT:
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{{#set: ec-number=ec-3.1.3.19}}
** [http://www.uniprot.org/uniprot/P0A6D7 P0A6D7]
 
** [http://www.uniprot.org/uniprot/Q9PIB5 Q9PIB5]
 
** [http://www.uniprot.org/uniprot/P07547 P07547]
 
** [http://www.uniprot.org/uniprot/P08566 P08566]
 
** [http://www.uniprot.org/uniprot/P43880 P43880]
 
** [http://www.uniprot.org/uniprot/P63600 P63600]
 
** [http://www.uniprot.org/uniprot/Q9CEU1 Q9CEU1]
 
** [http://www.uniprot.org/uniprot/P37944 P37944]
 
** [http://www.uniprot.org/uniprot/P0A6E1 P0A6E1]
 
** [http://www.uniprot.org/uniprot/P10880 P10880]
 
** [http://www.uniprot.org/uniprot/Q00497 Q00497]
 
** [http://www.uniprot.org/uniprot/P34003 P34003]
 
** [http://www.uniprot.org/uniprot/P43906 P43906]
 
** [http://www.uniprot.org/uniprot/P72796 P72796]
 
{{#set: ec-number=ec-2.7.1.71}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=orthofinder}}
 
{{#set: reconstruction tool=orthofinder}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=faecalibacterium|bifidobacterium}}
+
{{#set: reconstruction source=ecoli}}

Revision as of 17:51, 22 September 2020

Reaction GLYCEROL-2-PHOSPHATASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links