Difference between revisions of "FSU RS01295"

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(Created page with "Category:reaction == Reaction RXN-15025 == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.cc ec-2.3.1.cc] * direction: ** left-to-right == Reaction formula == * 1 Hi...")
(Created page with "Category:reaction == Reaction TRYPTOPHAN--TRNA-LIGASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.1.1.2 ec-6.1.1.2] * direction: ** left-to-right * common-name:...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-15025 ==
+
== Reaction TRYPTOPHAN--TRNA-LIGASE-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.cc ec-2.3.1.cc]
+
** [http://enzyme.expasy.org/EC/6.1.1.2 ec-6.1.1.2]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** tryptophan--trna ligase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Histone-Acetyl-Lysine]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-14762]][c] '''+''' 1 [[Histone-L-lysine]][c] '''+''' 1 [[NIACINAMIDE]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[TRP]][c] '''+''' 1 [[TRP-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-TRP-tRNAs]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS08385]]
+
* Gene: [[FISUC_RS02435]]
−
** Category: [[manual]]
+
** Category: [[annotation]]
−
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS04325]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY3O-4107]], NAD salvage pathway V (PNC V cycle):
+
* [[TRNA-CHARGING-PWY]], tRNA charging:
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''20''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: present in the annotation part of the emile network.
+
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: ec-number=ec-2.3.1.cc}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24081 24081]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03664 R03664]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P23381 P23381]
 +
** [http://www.uniprot.org/uniprot/Q9ZD76 Q9ZD76]
 +
** [http://www.uniprot.org/uniprot/O84589 O84589]
 +
** [http://www.uniprot.org/uniprot/Q9PIB4 Q9PIB4]
 +
** [http://www.uniprot.org/uniprot/Q9CJD1 Q9CJD1]
 +
** [http://www.uniprot.org/uniprot/P43835 P43835]
 +
** [http://www.uniprot.org/uniprot/Q9Z7A4 Q9Z7A4]
 +
** [http://www.uniprot.org/uniprot/Q9WYW2 Q9WYW2]
 +
** [http://www.uniprot.org/uniprot/O26352 O26352]
 +
** [http://www.uniprot.org/uniprot/O51038 O51038]
 +
** [http://www.uniprot.org/uniprot/Q9ZJX4 Q9ZJX4]
 +
** [http://www.uniprot.org/uniprot/Q9JTQ0 Q9JTQ0]
 +
** [http://www.uniprot.org/uniprot/Q58810 Q58810]
 +
** [http://www.uniprot.org/uniprot/O83640 O83640]
 +
** [http://www.uniprot.org/uniprot/P67590 P67590]
 +
** [http://www.uniprot.org/uniprot/O67115 O67115]
 +
** [http://www.uniprot.org/uniprot/P47372 P47372]
 +
** [http://www.uniprot.org/uniprot/P32921 P32921]
 +
** [http://www.uniprot.org/uniprot/Q12109 Q12109]
 +
** [http://www.uniprot.org/uniprot/Q49901 Q49901]
 +
** [http://www.uniprot.org/uniprot/P75510 P75510]
 +
** [http://www.uniprot.org/uniprot/O42875 O42875]
 +
** [http://www.uniprot.org/uniprot/O96771 O96771]
 +
** [http://www.uniprot.org/uniprot/P17248 P17248]
 +
** [http://www.uniprot.org/uniprot/P21656 P21656]
 +
** [http://www.uniprot.org/uniprot/P04803 P04803]
 +
** [http://www.uniprot.org/uniprot/P00954 P00954]
 +
</div>
 +
{{#set: ec-number=ec-6.1.1.2}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: common-name=tryptophan--trna ligase}}
 +
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction comment=present in the annotation part of the emile network.}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=reactions_add_147_emile_annot}}
+
{{#set: reconstruction source=genome}}

Revision as of 17:56, 22 September 2020

Reaction TRYPTOPHAN--TRNA-LIGASE-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • tryptophan--trna ligase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TRNA-CHARGING-PWY, tRNA charging:
    • 20 reactions found over 21 reactions in the full pathway

Reconstruction information

External links





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